RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TGFB1I1O43294 461 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 B4GALT3O60512 393 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 UBE4BO95155 1302 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 MBD3O95983 291 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 POMCP01189 267 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 STAG3L1P0CL83 205 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 CXCL8P10145 99 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 MCF2P10911 925 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 BMP6P22004 513 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 DNAJB2P25686 324 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 ADSSP30520 456 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 PBX3P40426 434 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 SCNN1GP51170 649 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 CYP2J2P51589 502 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 HTRA4P83105 476 aaPredicted RBP10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 MCL1Q07820 350 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 ALCAMQ13740 583 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 BMT2Q1RMZ1 405 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 ARMCX5Q6P1M9 558 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 STXBP4Q6ZWJ1 553 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 ABI1Q8IZP0 508 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 SPATA20Q8TB22 786 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 PHOSPHO2Q8TCD6 241 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 ZNF507Q8TCN5 953 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 POMGNT1Q8WZA1 660 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 KCNN1Q92952 543 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 FAM84AQ96KN4 292 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 CASD1Q96PB1 797 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 ELAC1Q9H777 363 aaKnown RBP10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 RMND1Q9NWS8 449 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 TMEM63CQ9P1W3 806 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 KCNG1Q9UIX4 513 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 PLAGL2Q9UPG8 496 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 EXOC7Q9UPT5 735 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 MRPL42Q9Y6G3 142 aaKnown RBP10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 TDRD15B5MCY1 1934 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 ANK1P16157 1881 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 SZT2Q5T011 3432 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 A0A0B4J269 797 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 A0A1W2PPC1 479 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 FAM189A1O60320 539 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 ZNF623O75123 536 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 CSPG5O95196 566 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 SKIP12755 728 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 GRM5P41594 1212 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 PRCPP42785 496 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 ACOT2P49753 483 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 WNT7BP56706 349 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 SPAG1Q07617 926 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 PSMD2Q13200 908 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 BTG3Q14201 252 aaPredicted RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 LRIT3Q3SXY7 679 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 HABP4Q5JVS0 413 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 ZNF658Q5TYW1 1059 aaPredicted RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 KLHL10Q6JEL2 608 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 CAVIN1Q6NZI2 390 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 GLB1LQ6UWU2 654 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 LRRC55Q6ZSA7 311 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 MRPL10Q7Z7H8 261 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 ZNF689Q96CS4 500 aaPredicted RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 PGBD4Q96DM1 585 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 GSDMAQ96QA5 445 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 RAD9AQ99638 391 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 TMEM117Q9H0C3 514 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 TMEM206Q9H813 350 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 AGPAT3Q9NRZ7 376 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 MIOSQ9NXC5 875 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 AGO2Q9UKV8 859 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 CTNND2Q9UQB3 1225 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 PCDHA11Q9Y5I1 949 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 CITO14578 2027 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 TRIP11Q15643 1979 aa10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-209ENST00000513818 LINC01553A4QN01 128 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 TRIM49BA6NDI0 452 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 ARL5CA6NH57 179 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 OGTO15294 1046 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 OFD1O75665 1012 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 EOMESO95936 686 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 ADRB2P07550 413 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 SCP2P22307 547 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 ABCD1P33897 745 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 PMS1P54277 932 aaKnown RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 SMAD3P84022 425 aaKnown RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 TAP1Q03518 808 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 MORC3Q14149 939 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 ENOX2Q16206 610 aaKnown RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 KNOP1Q1ED39 458 aaKnown RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 NOMO2Q5JPE7 1267 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 SPOUT1Q5T280 376 aaKnown RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 PPP2R2DQ66LE6 453 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 ELOA2Q8IYF1 753 aaPredicted RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 CMTR2Q8IYT2 770 aaKnown RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 HACE1Q8IYU2 909 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 LRRC43Q8N309 656 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms