RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PARP2Q9UGN5 583 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 WNT7AO00755 349 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 N4BP3O15049 544 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 THP07101 528 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 RPA1P27694 616 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 TUSC3Q13454 348 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 HSP90AA2PQ14568 343 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-216ENST00000512683 PPP2R5AQ15172 486 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 MAPK6Q16659 721 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 APBB1IPQ7Z5R6 666 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-216ENST00000512683 CATSPER3Q86XQ3 398 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 PALB2Q86YC2 1186 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 DIS3L2Q8IYB7 885 aaKnown RBP13.9□□□□□ -0.18
VEGFA-216ENST00000512683 ERMNQ8TAM6 284 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 PIGOQ8TEQ8 1089 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 RIN2Q8WYP3 895 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-216ENST00000512683 PIK3R5Q8WYR1 880 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 SHDQ96IW2 340 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 SNX27Q96L92 541 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 ADPGKQ9BRR6 497 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 TTPALQ9BTX7 342 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 NXF3Q9H4D5 531 aaKnown RBP13.9□□□□□ -0.18
VEGFA-216ENST00000512683 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
VEGFA-216ENST00000512683 ACKR2O00590 384 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 N4BP1O75113 896 aaKnown RBP13.89□□□□□ -0.19
VEGFA-216ENST00000512683 RFPL2O75678 378 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 NPTXRO95502 500 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 CYP11B2P19099 503 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 AKAP5P24588 427 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
VEGFA-216ENST00000512683 EFNA5P52803 228 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 FOSBP53539 338 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 MYADMQ96S97 322 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 APOL6Q9BWW8 343 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
VEGFA-216ENST00000512683 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 STK25O00506 426 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 B4GALT5O43286 388 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 PI15O43692 258 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 XYLBO75191 536 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 NAMPTP43490 491 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 PHLPP2Q6ZVD8 1323 aa13.88□□□□□ -0.19
VEGFA-216ENST00000512683 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 TRAPPC3O43617 180 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
VEGFA-216ENST00000512683 RFX1P22670 979 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 FSHRP23945 695 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 TRAPPC10P48553 1259 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
VEGFA-216ENST00000512683 RAB33AQ14088 237 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 DCAF4L1Q3SXM0 396 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 LIN9Q5TKA1 542 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 FAM171A1Q5VUB5 890 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 DCLRE1AQ6PJP8 1040 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 ERMP1Q7Z2K6 904 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 FRMD5Q7Z6J6 570 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-216ENST00000512683 KIFAP3Q92845 792 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 UROC1Q96N76 676 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 CLSTN3Q9BQT9 956 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 LLPHQ9BRT6 129 aaKnown RBP13.87□□□□□ -0.19
VEGFA-216ENST00000512683 FOXP1Q9H334 677 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-216ENST00000512683 KLK14Q9P0G3 267 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 KCNG1Q9UIX4 513 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 CDH7Q9ULB5 785 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 KCNH3Q9ULD8 1083 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 SIT1Q9Y3P8 196 aa13.87□□□□□ -0.19
VEGFA-216ENST00000512683 FAM186AA6NE01 2351 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 KRBA1A5PL33 1030 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 ARHGEF35A5YM69 484 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 CFHP08603 1231 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 SPATA31D3P0C874 917 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 STARD6P59095 220 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 PFKPQ01813 784 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 HTR4Q13639 388 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 PDIA5Q14554 519 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 RTP2Q5QGT7 225 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
VEGFA-216ENST00000512683 PADI6Q6TGC4 694 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 RSPO2Q6UXX9 243 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-216ENST00000512683 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-216ENST00000512683 SPATA31D4Q6ZUB0 917 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 MTSS1LQ765P7 747 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 DEPTORQ8TB45 409 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 FEZF2Q8TBJ5 459 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 RSAD2Q8WXG1 361 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 IFT74Q96LB3 600 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 OSBPL6Q9BZF3 934 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 PDZD7Q9H5P4 517 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 BACE2Q9Y5Z0 518 aa13.86□□□□□ -0.19
VEGFA-216ENST00000512683 F8W810 466 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 PTGESO14684 152 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms