RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 MB21D2Q8IYB1 491 aaPredicted RBP7.22□□□□□ -1.25
CLDND1-225ENST00000512147 NEDD1Q8NHV4 660 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 NCOA7Q8NI08 942 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 FAM200AQ8TCP9 573 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 ESR2Q92731 530 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 MSANTD3Q96H12 275 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 JAKMIP1Q96N16 626 aaKnown RBP7.22□□□□□ -1.25
CLDND1-225ENST00000512147 TBC1D32Q96NH3 1257 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 LGMNQ99538 433 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 APOL6Q9BWW8 343 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 UPF2Q9HAU5 1272 aaKnown RBP7.22□□□□□ -1.25
CLDND1-225ENST00000512147 ZNF334Q9HCZ1 680 aaPredicted RBP7.22□□□□□ -1.25
CLDND1-225ENST00000512147 IL17RBQ9NRM6 502 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 ZNF215Q9UL58 517 aaPredicted RBP7.22□□□□□ -1.25
CLDND1-225ENST00000512147 SLC6A14Q9UN76 642 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 MYH8P13535 1937 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 ABCA7Q8IZY2 2146 aa7.22□□□□□ -1.25
CLDND1-225ENST00000512147 KIF26AQ9ULI4 1882 aaPredicted RBP7.21□□□□□ -1.25
CLDND1-225ENST00000512147 GAS2O43903 313 aaKnown RBP7.21□□□□□ -1.26
CLDND1-225ENST00000512147 MGEA5O60502 916 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 NMT2O60551 498 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 TSPY3P0CV98 308 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 TSPY8P0CW00 308 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 PSMA5P28066 241 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 NOVP48745 357 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 NT5C2P49902 561 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 AK2P54819 239 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 NTHL1P78549 312 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 FAM189BP81408 668 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 VAC14Q08AM6 782 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 GRM2Q14416 872 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 TMEM266Q2M3C6 531 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 USP39Q53GS9 565 aaKnown RBP7.21□□□□□ -1.26
CLDND1-225ENST00000512147 ODR4Q5SWX8 454 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 CELF3Q5SZQ8 465 aaKnown RBP7.21□□□□□ -1.26
CLDND1-225ENST00000512147 SLFN13Q68D06 897 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 RCSD1Q6JBY9 416 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 DHX32Q7L7V1 743 aaKnown RBP7.21□□□□□ -1.26
CLDND1-225ENST00000512147 RALYLQ86SE5 291 aaKnown RBP7.21□□□□□ -1.26
CLDND1-225ENST00000512147 SPRYD3Q8NCJ5 442 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 ELSPBP1Q96BH3 223 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 CEP95Q96GE4 821 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 HIC2Q96JB3 615 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 ZKSCAN3Q9BRR0 538 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 MRPL9Q9BYD2 267 aaKnown RBP7.21□□□□□ -1.26
CLDND1-225ENST00000512147 TM6SF1Q9BZW5 370 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 MLXIPQ9HAP2 919 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 ZSWIM6Q9HCJ5 1215 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 STARD5Q9NSY2 213 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 DNAAF2Q9NVR5 837 aaKnown RBP7.21□□□□□ -1.26
CLDND1-225ENST00000512147 MTMR4Q9NYA4 1195 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 INVSQ9Y283 1065 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 SSX2IPQ9Y2D8 614 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 TRPV2Q9Y5S1 764 aa7.21□□□□□ -1.26
CLDND1-225ENST00000512147 PLIN4Q96Q06 1357 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 PDZD2O15018 2839 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 VPS37CA5D8V6 355 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 TNFRSF10BO14763 440 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 TEX28O15482 410 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 PRC1O43663 620 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 ZC3H11AO75152 810 aaKnown RBP eCLIP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 EIF3JO75822 258 aaKnown RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 GGPS1O95749 300 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 HMGB1P09429 215 aaKnown RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 HOXB4P17483 251 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 RPS6KB1P23443 525 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 MCM5P33992 734 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 ADRA1BP35368 520 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 ACTN2P35609 894 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 PI4KAP42356 2102 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 VASPP50552 380 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 KPNA1P52294 538 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 SEC23AQ15436 765 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 SMAD1Q15797 465 aaKnown RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 TANGO2Q6ICL3 276 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 KCNV1Q6PIU1 500 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 BLOC1S2Q6QNY1 142 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 RUFY3Q7L099 469 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 TMEM173Q86WV6 379 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 IQCA1Q86XH1 822 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 MAP4K3Q8IVH8 894 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 GMCL1P1Q8NEA9 526 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 ITFG1Q8TB96 612 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 CSGALNACT1Q8TDX6 532 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 IGDCC4Q8TDY8 1250 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 MKL1Q969V6 931 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 TCEANC2Q96MN5 208 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 ZSCAN10Q96SZ4 725 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 GAD1Q99259 594 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 LRRC2Q9BYS8 371 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 CELF4Q9BZC1 486 aaKnown RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 FAM49AQ9H0Q0 323 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-225ENST00000512147 TMPRSS4Q9NRS4 437 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 TUBE1Q9UJT0 475 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 THADAQ6YHU6 1953 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 PHLPP2Q6ZVD8 1323 aa7.2□□□□□ -1.26
CLDND1-225ENST00000512147 HIVEP3Q5T1R4 2406 aa7.19□□□□□ -1.26
CLDND1-225ENST00000512147 EML5Q05BV3 1969 aa7.19□□□□□ -1.26
CLDND1-225ENST00000512147 KAT6AQ92794 2004 aa7.19□□□□□ -1.26
CLDND1-225ENST00000512147 GOLGA8CPA6NN73 597 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms