RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 COASYQ13057 564 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
RNF4-215ENST00000511843 DCAF4L1Q3SXM0 396 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 GLRA4Q5JXX5 417 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 ANKRD54Q6NXT1 300 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 SYCE2Q6PIF2 218 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 GJD3Q8N144 294 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 TMEM161BQ8NDZ6 487 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 ZBTB45Q96K62 511 aaPredicted RBP14.6□□□□□ -0.07
RNF4-215ENST00000511843 TIPINQ9BVW5 301 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 MRPL4Q9BYD3 311 aaKnown RBP14.6□□□□□ -0.07
RNF4-215ENST00000511843 TMEM134Q9H6X4 195 aa14.6□□□□□ -0.07
RNF4-215ENST00000511843 TFIP11Q9UBB9 837 aaKnown RBP14.6□□□□□ -0.07
RNF4-215ENST00000511843 SRPRBQ9Y5M8 271 aaKnown RBP14.6□□□□□ -0.07
RNF4-215ENST00000511843 ANK1P16157 1881 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 ABLIM1O14639 778 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 SLC26A4O43511 780 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 KRT18P05783 430 aaKnown RBP14.59□□□□□ -0.07
RNF4-215ENST00000511843 MAPTP10636 758 aaKnown RBP14.59□□□□□ -0.07
RNF4-215ENST00000511843 EPCAMP16422 314 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 PKP1Q13835 747 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 SEZ6Q53EL9 994 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 C12orf76Q8N812 135 aaPredicted RBP14.59□□□□□ -0.07
RNF4-215ENST00000511843 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 LARP4BQ92615 738 aaKnown RBP14.59□□□□□ -0.07
RNF4-215ENST00000511843 PANK2Q9BZ23 570 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 GPR62Q9BZJ7 368 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 CCSER1Q9C0I3 900 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 ZHX3Q9H4I2 956 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 ZSCAN16Q9H4T2 348 aaPredicted RBP14.59□□□□□ -0.07
RNF4-215ENST00000511843 EPHX3Q9H6B9 360 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 C17orf75Q9HAS0 396 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 PTPRHQ9HD43 1115 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 ANKFY1Q9P2R3 1169 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 FAM50BQ9Y247 325 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 RBM19Q9Y4C8 960 aaKnown RBP14.59□□□□□ -0.07
RNF4-215ENST00000511843 DENND4AQ7Z401 1863 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 ZMYM2Q9UBW7 1377 aa14.59□□□□□ -0.07
RNF4-215ENST00000511843 TCHHQ07283 1943 aa14.58□□□□□ -0.07
RNF4-215ENST00000511843 A0A087X0B3 334 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 FAM13AO94988 1023 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 KIF4AO95239 1232 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 SOD2P04179 222 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 THP07101 528 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 WEE2P0C1S8 567 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 MYBP10242 640 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 IGFBP6P24592 240 aaPredicted RBP14.58□□□□□ -0.08
RNF4-215ENST00000511843 TUSC3Q13454 348 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 GIT2Q14161 759 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 SLC39A14Q15043 492 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 NAB2Q15742 525 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 TMEM184AQ6ZMB5 413 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 ADHFE1Q8IWW8 467 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 KCTD17Q8N5Z5 321 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 SLC22A17Q8WUG5 538 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 SPIRE2Q8WWL2 714 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 NTPCRQ9BSD7 190 aaKnown RBP14.58□□□□□ -0.08
RNF4-215ENST00000511843 TCHPQ9BT92 498 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 HERC2P3Q9BVR0 1158 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 COLEC11Q9BWP8 271 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 S1PR5Q9H228 398 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 GOLGA2P5Q9HBQ8 144 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 KCND2Q9NZV8 630 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 ODF2LQ9ULJ1 636 aa14.58□□□□□ -0.08
RNF4-215ENST00000511843 CARNS1A5YM72 827 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 K7ENM7 598 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 MEFVO15553 781 aaPredicted RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 LILRB3O75022 631 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 NR1I2O75469 434 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 EFEMP2O95967 443 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 URODP06132 367 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 CNPP09543 421 aaKnown RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 PROZP22891 400 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 SP100P23497 879 aaPredicted RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 GRM5P41594 1212 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 NASPP49321 788 aaPredicted RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 GLUD2P49448 558 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 SMTNP53814 917 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 NCKAP1LP55160 1127 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 STRN3Q13033 797 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 HSP90AA2PQ14568 343 aaPredicted RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 BMS1Q14692 1282 aaKnown RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 STK38Q15208 465 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 FUT10Q6P4F1 479 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 MPZL3Q6UWV2 235 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 DYMQ7RTS9 669 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 HAUS6Q7Z4H7 955 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 GLYCTKQ8IVS8 523 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 RNF168Q8IYW5 571 aaPredicted RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 TMEM130Q8N3G9 435 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 MYCT1Q8N699 235 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 KRI1Q8N9T8 703 aaKnown RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 CASP10Q92851 521 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 KLHL5Q96PQ7 755 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 HAPLN2Q9GZV7 340 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 MRPL17Q9NRX2 175 aaKnown RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 LARSQ9P2J5 1176 aaKnown RBP14.57□□□□□ -0.08
RNF4-215ENST00000511843 ADAM28Q9UKQ2 775 aa14.57□□□□□ -0.08
RNF4-215ENST00000511843 IRAK3Q9Y616 596 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms