RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CFAP20Q9Y6A4 193 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 UBE2QL1A1L167 161 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 LAMTOR5O43504 91 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 SREBF1P36956 1147 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 GNALP38405 381 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 SLC6A9P48067 706 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 TBX4P57082 545 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 CDC42EP1Q00587 391 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 APBA1Q02410 837 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 PRAMEF14Q5SWL7 426 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 THEMIS2Q5TEJ8 643 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 GADL1Q6ZQY3 521 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 PRRT2Q7Z6L0 340 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 PRR18Q8N4B5 295 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 ZBTB34Q8NCN2 500 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 CFHR4Q92496 578 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 HOXB13Q92826 284 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 RGMAQ96B86 450 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 CYFIP2Q96F07 1278 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 TMEM176AQ96HP8 235 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 PTPN18Q99952 460 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 TCF25Q9BQ70 676 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 C1orf112Q9NSG2 853 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 AJAP1Q9UKB5 411 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 SIK3Q9Y2K2 1263 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 PCDHB1Q9Y5F3 818 aa4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 FRMPD2Q68DX3 1309 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 MYBBP1AQ9BQG0 1328 aaKnown RBP4.36□□□□□ -1.71
TRAPPC11-207ENST00000511409 NPEPPSL1A6NEC2 478 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 MATN2O00339 956 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 SGTAO43765 313 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 CAND2O75155 1236 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 GPR32O75388 356 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 ALDH2P05091 517 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 KRT18P05783 430 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 RAP2AP10114 183 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 IL2RBP14784 551 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 DDCP20711 480 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 GZMKP49863 264 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 ADAM8P78325 824 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 TARDBPQ13148 414 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 SAFB2Q14151 953 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 GRM3Q14832 879 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 LLGL1Q15334 1064 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 KHDC1Q4VXA5 237 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 UBXN11Q5T124 520 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 B3GNT9Q6UX72 402 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 KSR2Q6VAB6 950 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 GGNQ86UU5 652 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 TAX1BP1Q86VP1 789 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 DGKHQ86XP1 1220 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 DENND1CQ8IV53 801 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 CCDC146Q8IYE0 955 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 TRMT2AQ8IZ69 625 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 LILRA3Q8N6C8 439 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 PPP1R35Q8TAP8 253 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 RUNDC1Q96C34 613 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 IL17RAQ96F46 866 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 GNRHR2Q96P88 292 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 OR14A2Q96R54 314 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 CGRRF1Q99675 332 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 VRK1Q99986 396 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 SEC61A2Q9H9S3 476 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 DDX20Q9UHI6 824 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 RUVBL1Q9Y265 456 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 DUSP10Q9Y6W6 482 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 ZMYM3Q14202 1370 aa4.35□□□□□ -1.71
TRAPPC11-207ENST00000511409 LRRC14BA6NHZ5 514 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 PRICKLE3O43900 615 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 FPR1P21462 350 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 SMARCA1P28370 1054 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 EPHB4P54760 987 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 DSC2Q02487 901 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 CREMQ03060 361 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 EFEMP1Q12805 493 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 SLFN13Q68D06 897 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 FAM111BQ6SJ93 734 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 ADGRE4PQ86SQ3 457 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 DAAM2Q86T65 1068 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 GPR135Q8IZ08 494 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 ZGPATQ8N5A5 531 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 SH2D3CQ8N5H7 860 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 C3orf20Q8ND61 904 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 TIFAQ96CG3 184 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 FAM193BQ96PV7 902 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 PLA2G12BQ9BX93 195 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 ADAM7Q9H2U9 754 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 FAM204AQ9H8W3 233 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 ARMT1Q9H993 441 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 AGO3Q9H9G7 860 aaKnown RBP4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 MAN1C1Q9NR34 630 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 MOCS1Q9NZB8 636 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 HDAC5Q9UQL6 1122 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 POLHQ9Y253 713 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 PCDHA3Q9Y5H8 950 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 NR2E3Q9Y5X4 410 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 ACTL7AQ9Y615 435 aa4.34□□□□□ -1.71
TRAPPC11-207ENST00000511409 PMS2P1A4D2B8 440 aa4.33□□□□□ -1.72
TRAPPC11-207ENST00000511409 H3BML4 177 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms