RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 MXD3Q9BW11 206 aa9.28□□□□□ -0.92
LINC01088-207ENST00000511241 GREM2Q9H772 168 aa9.28□□□□□ -0.92
LINC01088-207ENST00000511241 KCNK12Q9HB15 430 aa9.28□□□□□ -0.92
LINC01088-207ENST00000511241 GCM1Q9NP62 436 aa9.28□□□□□ -0.92
LINC01088-207ENST00000511241 H2AFY2Q9P0M6 372 aaPredicted RBP9.28□□□□□ -0.92
LINC01088-207ENST00000511241 PGAP2Q9UHJ9 254 aa9.28□□□□□ -0.92
LINC01088-207ENST00000511241 FANCIQ9NVI1 1328 aa9.28□□□□□ -0.92
LINC01088-207ENST00000511241 CYP2C8P10632 490 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 ATF2P15336 505 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 SLC9A1P19634 815 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 IGFBP6P24592 240 aaPredicted RBP9.27□□□□□ -0.93
LINC01088-207ENST00000511241 DLG4P78352 724 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 EXOSC9Q06265 439 aaKnown RBP9.27□□□□□ -0.93
LINC01088-207ENST00000511241 FAPQ12884 760 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 CCDC152Q4G0S7 254 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 XP32Q5T750 250 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 GPR158Q5T848 1215 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 UBE3BQ7Z3V4 1068 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 NECAB2Q7Z6G3 386 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 SPATS2Q86XZ4 545 aaKnown RBP9.27□□□□□ -0.93
LINC01088-207ENST00000511241 SCAF8Q9UPN6 1271 aaKnown RBP9.27□□□□□ -0.93
LINC01088-207ENST00000511241 FAN1Q9Y2M0 1017 aa9.27□□□□□ -0.93
LINC01088-207ENST00000511241 SNAP23O00161 211 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 FARP2O94887 1054 aaPredicted RBP9.26□□□□□ -0.93
LINC01088-207ENST00000511241 DDX58O95786 925 aaKnown RBP9.26□□□□□ -0.93
LINC01088-207ENST00000511241 C8BP07358 591 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 ENO2P09104 434 aaPredicted RBP9.26□□□□□ -0.93
LINC01088-207ENST00000511241 KLRK1P26718 216 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 ID4P47928 161 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 CTCFP49711 727 aaPredicted RBP9.26□□□□□ -0.93
LINC01088-207ENST00000511241 NCKAP1LP55160 1127 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 PHC1P78364 1004 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 MESP2Q0VG99 397 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 CD276Q5ZPR3 534 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 SAPCD2Q86UD0 394 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 ANKRD18AQ8IVF6 992 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 IGDCC3Q8IVU1 814 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 FAM26EQ8N5C1 309 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 DPF2Q92785 391 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 SGPP1Q9BX95 441 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 STK31Q9BXU1 1019 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 TOMM22Q9NS69 142 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 ASB1Q9Y576 335 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 SCN9AQ15858 1988 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
LINC01088-207ENST00000511241 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.25□□□□□ -0.93
LINC01088-207ENST00000511241 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.25□□□□□ -0.93
LINC01088-207ENST00000511241 TGM5O43548 720 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 TMEM253P0C7T8 217 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 GLDCP23378 1020 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 AOAHP28039 575 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 LSP1P33241 339 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 CDKN1CP49918 316 aaPredicted RBP9.25□□□□□ -0.93
LINC01088-207ENST00000511241 ADCY1Q08828 1119 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 LRRC32Q14392 662 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 CATSPEREQ5SY80 951 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 SMARCC2Q8TAQ2 1214 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 SLC5A5Q92911 643 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 E2F7Q96AV8 911 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 GBP4Q96PP9 640 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 EYA3Q99504 573 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 IL16Q14005 1332 aa9.25□□□□□ -0.93
LINC01088-207ENST00000511241 MED14OSP0DP75 135 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 MC3RP41968 323 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 EPHB3P54753 998 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 SMAD3P84022 425 aaKnown RBP9.24□□□□□ -0.93
LINC01088-207ENST00000511241 TMPRSS15P98073 1019 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 FOXO4P98177 505 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 GCKRQ14397 625 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 EPHA7Q15375 998 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 SMAD2Q15796 467 aaKnown RBP9.24□□□□□ -0.93
LINC01088-207ENST00000511241 VASNQ6EMK4 673 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 SYDE1Q6ZW31 735 aaPredicted RBP9.24□□□□□ -0.93
LINC01088-207ENST00000511241 PROSER1Q86XN7 944 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
LINC01088-207ENST00000511241 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 ASB15Q8WXK1 588 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 C16orf92Q96LL3 132 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 PPP1R16BQ96T49 567 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 HOMER2Q9NSB8 354 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 TYW1Q9NV66 732 aaKnown RBP9.24□□□□□ -0.93
LINC01088-207ENST00000511241 GGA3Q9NZ52 723 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 ARHGAP28Q9P2N2 729 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 XDHP47989 1333 aa9.24□□□□□ -0.93
LINC01088-207ENST00000511241 ETV2O00321 342 aaPredicted RBP9.23□□□□□ -0.93
LINC01088-207ENST00000511241 PAX4O43316 350 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 MMEP08473 750 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 RPS12P25398 132 aaKnown RBP9.23□□□□□ -0.93
LINC01088-207ENST00000511241 CD40P25942 277 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 HUNKP57058 714 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 SESN3P58005 492 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 NEXNQ0ZGT2 675 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 TERF2Q15554 542 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 EPHA10Q5JZY3 1008 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 PRAMEF18Q5VWM3 479 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 LHFPL2Q6ZUX7 228 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 ZNF610Q8N9Z0 462 aa9.23□□□□□ -0.93
LINC01088-207ENST00000511241 BHLHE22Q8NFJ8 381 aaPredicted RBP9.23□□□□□ -0.93
LINC01088-207ENST00000511241 IGDCC4Q8TDY8 1250 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms