RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 TRMT13Q9NUP7 481 aaKnown RBP18.17■□□□□ 0.5
SCAMP1-203ENST00000510030 INTS13Q9NVM9 706 aa18.17■□□□□ 0.5
SCAMP1-203ENST00000510030 DCDC2CA8MYV0 355 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 ABLIM1O14639 778 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 B4GALT5O43286 388 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 B4GALT4O60513 344 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 IQCF3P0C7M6 154 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 TRIM21P19474 475 aaKnown RBP18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 FMO5P49326 533 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 MGAT3Q09327 533 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 ANKRD33Q7Z3H0 272 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 NT5DC4Q86YG4 428 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 FAM126BQ8IXS8 530 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 ZNF397Q8NF99 534 aaPredicted RBP18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 CCDC94Q9BW85 323 aaPredicted RBP18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 TOPORSQ9NS56 1045 aaPredicted RBP18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 CPSF3Q9UKF6 684 aaKnown RBP18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 PIN4Q9Y237 131 aaKnown RBP18.16■□□□□ 0.5
SCAMP1-203ENST00000510030 GOLGA8IPA6NC78 632 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 GOLGA8JA6NMD2 632 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 TEX33O43247 280 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 EDN1P05305 212 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 HARSP12081 509 aaKnown RBP18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 MXI1P50539 228 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 FXR1P51114 621 aaKnown RBP eCLIP18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 RAB27AP51159 221 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 YARSP54577 528 aaKnown RBP18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 CLDN10P78369 228 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 MYL7Q01449 175 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 PAK2Q13177 524 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 SYCP1Q15431 976 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 EXOC3L4Q17RC7 722 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 TRIM71Q2Q1W2 868 aaKnown RBP18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 KRT39Q6A163 491 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 ZBTB33Q86T24 672 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 WDR49Q8IV35 697 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 SPC24Q8NBT2 197 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 NEK11Q8NG66 645 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 PPP1R13LQ8WUF5 828 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 FAM81BQ96LP2 452 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 ASB7Q9H672 318 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 RPF1Q9H9Y2 349 aaKnown RBP18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 TMEM8AQ9HCN3 771 aa18.15■□□□□ 0.5
SCAMP1-203ENST00000510030 A0A1W2PQJ5 194 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 FAM189A1O60320 539 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 ADRB2P07550 413 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 CTSHP09668 335 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 SKIP12755 728 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 ZSCAN20P17040 1043 aaPredicted RBP18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 GRM5P41594 1212 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 ACOT2P49753 483 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 TSR1Q2NL82 804 aaKnown RBP18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 FBXO47Q5MNV8 452 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 SMYD5Q6GMV2 418 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 CHRDL2Q6WN34 429 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 UBE2Q1Q7Z7E8 422 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 DPF3Q92784 378 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 CCDC127Q96BQ5 260 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 ZBTB45Q96K62 511 aaPredicted RBP18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 CGRRF1Q99675 332 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 PLEKHA5Q9HAU0 1116 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 PLCB1Q9NQ66 1216 aa18.14■□□□□ 0.49
SCAMP1-203ENST00000510030 CSDE1O75534 798 aaKnown RBP18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 CD4P01730 458 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 CHRNA1P02708 482 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 COL6A1P12109 1028 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 CKBP12277 381 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 SELPP16109 830 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 TNNI1P19237 187 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 HOXA11P31270 313 aaPredicted RBP18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 CRELD2Q6UXH1 353 aaPredicted RBP18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 SLC39A5Q6ZMH5 540 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 FAM228AQ86W67 206 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 THNSL1Q8IYQ7 743 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 CCDC112Q8NEF3 446 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 TMEM40Q8WWA1 233 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 CPB2Q96IY4 423 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 ACAP3Q96P50 834 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 TRAIPQ9BWF2 469 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 TRPV6Q9H1D0 765 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 C11orf49Q9H6J7 331 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 CDHR5Q9HBB8 845 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 RNF216Q9NWF9 866 aaPredicted RBP18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 GCNT4Q9P109 453 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 FBXL5Q9UKA1 691 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 NOC2LQ9Y3T9 749 aaKnown RBP18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 RALGAPA2Q2PPJ7 1873 aa18.13■□□□□ 0.49
SCAMP1-203ENST00000510030 TTLL13PA6NNM8 815 aa18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 ZC3H11AO75152 810 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 STAG3L1P0CL83 205 aa18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 DLATP10515 647 aaKnown RBP18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 EEF1DP3Q658K8 133 aa18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 TWF2Q6IBS0 349 aaKnown RBP18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 NECAB2Q7Z6G3 386 aa18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 DIS3LQ8TF46 1054 aaKnown RBP18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 CACTINQ8WUQ7 758 aaKnown RBP18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 DHX38Q92620 1227 aaKnown RBP18.12■□□□□ 0.49
SCAMP1-203ENST00000510030 FTHL17Q9BXU8 183 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms