RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 HIDE1A8MVS5 230 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 TISP43B9A030 160 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 FSCN2O14926 492 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 N4BP3O15049 544 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 TBX10O75333 385 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 PPP1R37O75864 691 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 AKAP5P24588 427 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 NMT1P30419 496 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 HOXD13P35453 343 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 LTBRP36941 435 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 STAT6P42226 847 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 NAMPTP43490 491 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 SLC11A1P49279 550 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 AFF1P51825 1210 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 EFNA5P52803 228 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 PEX3P56589 373 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 KCNA1Q09470 495 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 SMAD4Q13485 552 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 COL19A1Q14993 1142 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 DUSP6Q16828 381 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 NT5DC1Q5TFE4 455 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 EEF1DP3Q658K8 133 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 SLC39A4Q6P5W5 647 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 APBB1IPQ7Z5R6 666 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 SFR1Q86XK3 245 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 ZNF280BQ86YH2 543 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 FAM178BQ8IXR5 827 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 GJD3Q8N144 294 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 TMEM130Q8N3G9 435 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 TMEM161BQ8NDZ6 487 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 PAGE5Q96GU1 130 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 IGSF21Q96ID5 467 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 PRIMPOLQ96LW4 560 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 DRC1Q96MC2 740 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 RPS6KC1Q96S38 1066 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 TRIM9Q9C026 710 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 RNF39Q9H2S5 420 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 NXF3Q9H4D5 531 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 KLK14Q9P0G3 267 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 ARHGAP28Q9P2N2 729 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 BARX2Q9UMQ3 279 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 GIT1Q9Y2X7 761 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 PRG3Q9Y2Y8 225 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 ATP6V1DQ9Y5K8 247 aa9.61□□□□□ -0.87
PDLIM5-213ENST00000509357 K7ERI5 159 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 ACKR2O00590 384 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 NRP1O14786 923 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 SLC16A4O15374 487 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 DDHD2O94830 711 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 ZNF202O95125 648 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 AFMP43652 599 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 SCNN1GP51170 649 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 NCKAP1LP55160 1127 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 DMP1Q13316 513 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 ZC2HC1CQ53FD0 456 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 CNNM4Q6P4Q7 775 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 PPP4R3CPQ6ZMV5 832 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 KRBA2Q6ZNG9 492 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 DDX53Q86TM3 631 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 MRPL43Q8N983 215 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 ZSWIM2Q8NEG5 633 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 AUTS2Q8WXX7 1259 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 ZFP42Q96MM3 310 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 TMEM175Q9BSA9 504 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 COLEC11Q9BWP8 271 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 APOL5Q9BWW9 433 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 FZD8Q9H461 694 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 KMT5AQ9NQR1 393 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 STK39Q9UEW8 545 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 MUC3AQ02505 3323 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 ZMYM2Q9UBW7 1377 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 BRWD1Q9NSI6 2320 aa9.6□□□□□ -0.87
PDLIM5-213ENST00000509357 PLXNA4Q9HCM2 1894 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 TCF20Q9UGU0 1960 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 C2orf71A6NGG8 1288 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 MBTPS2O43462 519 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 B4GALT3O60512 393 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 PRPF40AO75400 957 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 KRT18P05783 430 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 SLFN14P0C7P3 912 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 MYBP10242 640 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 PLS3P13797 630 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 SYKP43405 635 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 SMTNP53814 917 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 RBM10P98175 930 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 COASYQ13057 564 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 SMAD2Q15796 467 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 FAM187BQ17R55 369 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 ATF7IP2Q5U623 682 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 KIAA1841Q6NSI8 718 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 SV2BQ7L1I2 683 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 TMEM173Q86WV6 379 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 KCTD17Q8N5Z5 321 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 CEP120Q8N960 986 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 GPT2Q8TD30 523 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 CASP10Q92851 521 aa9.59□□□□□ -0.87
PDLIM5-213ENST00000509357 ZBTB45Q96K62 511 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms