RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 CCNA1P78396 465 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 CUL1Q13616 776 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 KIF22Q14807 665 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 TRMT1LQ7Z2T5 733 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 USP37Q86T82 979 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 LNX1Q8TBB1 728 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 SLC7A3Q8WY07 619 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 IFT81Q8WYA0 676 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 ZIC5Q96T25 663 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 PCYT2Q99447 389 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 POLR3FQ9H1D9 316 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 NOC2LQ9Y3T9 749 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-203ENST00000508736 MANSC4A6NHS7 340 aaPredicted RBP12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 ASB14A6NK59 587 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 TISP43B9A030 160 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 ANKRD63C9JTQ0 380 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 AOC2O75106 756 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 LGR5O75473 907 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 GGPS1O95749 300 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 PIGRP01833 764 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 ARL2P36404 184 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 MRPS25P82663 173 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 SNRNP35Q16560 246 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 EPC2Q52LR7 807 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 C1orf220Q5T0J3 134 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 CFAP58Q5T655 872 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 KLHL7Q8IXQ5 586 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 SCFD2Q8WU76 684 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 ZBTB9Q96C00 473 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 PTPN18Q99952 460 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 SYT11Q9BT88 431 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 SLITRK6Q9H5Y7 841 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 KIAA1586Q9HCI6 787 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.41
PRPF40B-203ENST00000508736 EMSYQ7Z589 1322 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 ANKRD62A6NC57 917 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 A6NNZ2 444 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 BTBD19C9JJ37 291 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 RAD51CO43502 376 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 GAS2O43903 313 aaKnown RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 MAFO75444 373 aaPredicted RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 GTF2H1P32780 548 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 TCF7P36402 384 aaPredicted RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 CARSP49589 748 aaKnown RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 SLC26A2P50443 739 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 PPP3CAQ08209 521 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 PPP2R5EQ16537 467 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 TUBB8Q3ZCM7 444 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 CELF3Q5SZQ8 465 aaKnown RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 SLC39A4Q6P5W5 647 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 CCDC62Q6P9F0 684 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 PLPPR4Q7Z2D5 763 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 NT5DC3Q86UY8 548 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 ABRAQ8N0Z2 381 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 METTL13Q8N6R0 699 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 RDH13Q8NBN7 331 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 CASKIN2Q8WXE0 1202 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 RIN2Q8WYP3 895 aaPredicted RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 HES6Q96HZ4 224 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 KIFC3Q9BVG8 833 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 R3HDMLQ9H3Y0 253 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 SEPT11Q9NVA2 429 aaKnown RBP12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 COQ4Q9Y3A0 265 aa12.46□□□□□ -0.42
PRPF40B-203ENST00000508736 PDHXO00330 501 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 KRIT1O00522 736 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 HNRNPDLO14979 420 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 PGK2P07205 417 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 ADRB2P07550 413 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 HSPA6P17066 643 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 GCLCP48506 637 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 RNASE9P60153 205 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 DLG4P78352 724 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 NOGQ13253 232 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 TAS1R3Q7RTX0 852 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 ANKRD23Q86SG2 305 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 RHOT2Q8IXI1 618 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 CCDC26Q8TAB7 109 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 SLC35G2Q8TBE7 412 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 PARD3BQ8TEW8 1205 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 GPR20Q99678 358 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 GPR88Q9GZN0 384 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 ISCUQ9H1K1 167 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 TMEM134Q9H6X4 195 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 MORF4L1Q9UBU8 362 aa12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 TTC7AQ9ULT0 858 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-203ENST00000508736 STRNO43815 780 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms