RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ST8SIA2Q92186 375 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 HDAC10Q969S8 669 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 ARL8AQ96BM9 186 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 HSPBAP1Q96EW2 488 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 ADOQ96SZ5 270 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 CPEB1Q9BZB8 566 aaKnown RBP3.85□□□□□ -1.79
GYPB-207ENST00000506679 CSRNP2Q9H175 543 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 SAP30BPQ9UHR5 308 aaKnown RBP3.85□□□□□ -1.79
GYPB-207ENST00000506679 INTUQ9ULD6 942 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 ANKRD6Q9Y2G4 727 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 TSC22D4Q9Y3Q8 395 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 NCANO14594 1321 aa3.85□□□□□ -1.79
GYPB-207ENST00000506679 CCDC154A6NI56 674 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 CAPN14A8MX76 684 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 CXorf49A8MYA2 514 aaPredicted RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 B8ZZF3 427 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 PRRG2O14669 202 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 MUSKO15146 869 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 PPM1GO15355 546 aaPredicted RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 IPO13O94829 963 aaKnown RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 IL2RBP14784 551 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 VCAM1P19320 739 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 AKAP5P24588 427 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 ACRV1P26436 265 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 PCSK1P29120 753 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 CDC42EP1Q00587 391 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 DSC2Q02487 901 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 TARDBPQ13148 414 aaKnown RBP eCLIP3.84□□□□□ -1.79
GYPB-207ENST00000506679 PRKD1Q15139 912 aaPredicted RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 BMT2Q1RMZ1 405 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 RRP12Q5JTH9 1297 aaKnown RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 ANKS6Q68DC2 871 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 OTUD7BQ6GQQ9 843 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 DRICH1Q6PGQ1 229 aaPredicted RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 Q6ZRM9 215 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 MIGA2Q7L4E1 593 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 ELOA2Q8IYF1 753 aaPredicted RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 MIER2Q8N344 545 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 ZGPATQ8N5A5 531 aaKnown RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 NSUN6Q8TEA1 469 aaKnown RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 MRGPRX4Q96LA9 322 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 DMRTA2Q96SC8 542 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 CDK5RAP1Q96SZ6 601 aaKnown RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 C7orf25Q9BPX7 421 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 SLC12A5Q9H2X9 1139 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 DEF6Q9H4E7 631 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 MANSC1Q9H8J5 431 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 ZIM2Q9NZV7 527 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 FAM30AQ9NZY2 134 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 IP6K2Q9UHH9 426 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 PNMA8BQ9ULN7 279 aaPredicted RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 PCDHB1Q9Y5F3 818 aa3.84□□□□□ -1.79
GYPB-207ENST00000506679 CFAP20Q9Y6A4 193 aaKnown RBP3.84□□□□□ -1.79
GYPB-207ENST00000506679 TBKBP1A7MCY6 615 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 GRXCR1A8MXD5 290 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 CYP27B1O15528 508 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 MFAP3LO75121 409 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 GPR32O75388 356 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 POU2F2P09086 479 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 PF4V1P10720 104 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 ZSCAN20P17040 1043 aaPredicted RBP3.83□□□□□ -1.8
GYPB-207ENST00000506679 GNAT2P19087 354 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 FPR1P21462 350 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 PTPN7P35236 360 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 FXR1P51114 621 aaKnown RBP eCLIP3.83□□□□□ -1.8
GYPB-207ENST00000506679 HHEXQ03014 270 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 IL10RAQ13651 578 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 UAP1L1Q3KQV9 507 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 AFMIDQ63HM1 303 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 SEM1Q6ZVN7 128 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 PRRT2Q7Z6L0 340 aaPredicted RBP3.83□□□□□ -1.8
GYPB-207ENST00000506679 FAM83AQ86UY5 434 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 SGMS1Q86VZ5 419 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 XYLT1Q86Y38 959 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 SLC35B2Q8TB61 432 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 IFI44Q8TCB0 444 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 JPH3Q8WXH2 748 aaPredicted RBP3.83□□□□□ -1.8
GYPB-207ENST00000506679 JDP2Q8WYK2 163 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 AIFM3Q96NN9 605 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 UHRF1Q96T88 793 aaPredicted RBP3.83□□□□□ -1.8
GYPB-207ENST00000506679 LDAHQ9H6V9 325 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 METTL14Q9HCE5 456 aaKnown RBP3.83□□□□□ -1.8
GYPB-207ENST00000506679 MOCS1Q9NZB8 636 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 KLHL42Q9P2K6 505 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 SLC23A1Q9UHI7 598 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 ZNF180Q9UJW8 692 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 AJAP1Q9UKB5 411 aaPredicted RBP3.83□□□□□ -1.8
GYPB-207ENST00000506679 EID1Q9Y6B2 187 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 PNPLA7Q6ZV29 1317 aa3.83□□□□□ -1.8
GYPB-207ENST00000506679 MYBBP1AQ9BQG0 1328 aaKnown RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 PLSCR1O15162 318 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 IL33O95760 270 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 SCGB1D2O95969 90 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 ADRB1P08588 477 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 SNRPA1P09661 255 aaKnown RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 DDCP20711 480 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 PDCP20941 246 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 HIBADHP31937 336 aaKnown RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 ALDH1A3P47895 512 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms