RNA–Protein interactions for RNA: ENST00000504937.5

TP53-209, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-209ENST00000504937 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
TP53-209ENST00000504937 ZDHHC24Q6UX98 284 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 PACS2Q86VP3 889 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 FAM71AQ8IYT1 594 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 CARD9Q9H257 536 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 RASSF4Q9H2L5 321 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 SLITRK6Q9H5Y7 841 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 DENND3A2RUS2 1198 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
TP53-209ENST00000504937 STBD1O95210 358 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 DR1Q01658 176 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 GHRHRQ02643 423 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 DUPD1Q68J44 220 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 TAS1R3Q7RTX0 852 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 C4orf19Q8IY42 314 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 GPC2Q8N158 579 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 FBXO25Q8TCJ0 367 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 NEK9Q8TD19 979 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 PARD3BQ8TEW8 1205 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 TXLNGYQ9BZA5 131 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 RNF181Q9P0P0 153 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 FAM169AQ9Y6X4 670 aa11.69□□□□□ -0.54
TP53-209ENST00000504937 SSC5DA1L4H1 1573 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 PARP14Q460N5 1801 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 NDUFAB1O14561 156 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 SH3BP5O60239 455 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 LYPLA2O95372 231 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 DLATP10515 647 aaKnown RBP11.68□□□□□ -0.54
TP53-209ENST00000504937 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
TP53-209ENST00000504937 MDH1P40925 334 aaKnown RBP11.68□□□□□ -0.54
TP53-209ENST00000504937 PTGIRP43119 386 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 KCNJ1P48048 391 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 PLTPP55058 493 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 FSTL1Q12841 308 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 RNF207Q6ZRF8 634 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 JAMLQ86YT9 394 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 DDX1Q92499 740 aaKnown RBP11.68□□□□□ -0.54
TP53-209ENST00000504937 CD101Q93033 1021 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 ZSWIM1Q9BR11 485 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 HERPUD2Q9BSE4 406 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
TP53-209ENST00000504937 DICER1Q9UPY3 1922 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 VWA5AO00534 786 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 KIAA0391O15091 583 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 CFHP08603 1231 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 MYZAPP0CAP1 466 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 CYP11B1P15538 503 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 PSMC5P62195 406 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 GPC5P78333 572 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 PTGISQ16647 500 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 EMC10Q5UCC4 262 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 ARHGEF16Q5VV41 709 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 NIPA1Q7RTP0 329 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 CCDC26Q8TAB7 109 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 UHMK1Q8TAS1 419 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 SHC3Q92529 594 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 ERP44Q9BS26 406 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 PPANQ9NQ55 473 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 XPNPEP1Q9NQW7 623 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 TBC1D22BQ9NU19 505 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 GRHL1Q9NZI5 618 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 GABBR1Q9UBS5 961 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 SLC12A6Q9UHW9 1150 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 NOVA2Q9UNW9 492 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
TP53-209ENST00000504937 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 PCDHA3Q9Y5H8 950 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 RLFQ13129 1914 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 O00370 1275 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 PTPRAP18433 802 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 RPL21P46778 160 aaKnown RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 LIG3P49916 1009 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 HMGCS2P54868 508 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 SIX1Q15475 284 aaPredicted RBP11.67□□□□□ -0.54
TP53-209ENST00000504937 SV2AQ7L0J3 742 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 MCF2L2Q86YR7 1114 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 MAP4K3Q8IVH8 894 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 MDM1Q8TC05 714 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 ZNF516Q92618 1163 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 KAT2BQ92831 832 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 FMO2Q99518 471 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 NUP85Q9BW27 656 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 PTPN22Q9Y2R2 807 aa11.67□□□□□ -0.54
TP53-209ENST00000504937 PTPRJQ12913 1337 aa11.66□□□□□ -0.54
TP53-209ENST00000504937 WDR64B1ANS9 1081 aa11.66□□□□□ -0.54
TP53-209ENST00000504937 EBAG9O00559 213 aa11.66□□□□□ -0.54
TP53-209ENST00000504937 CAND2O75155 1236 aa11.66□□□□□ -0.54
TP53-209ENST00000504937 RTN2O75298 545 aa11.66□□□□□ -0.54
TP53-209ENST00000504937 MAGOHP61326 146 aaKnown RBP11.66□□□□□ -0.54
TP53-209ENST00000504937 QPCTQ16769 361 aa11.66□□□□□ -0.54
TP53-209ENST00000504937 CCDC60Q8IWA6 550 aaPredicted RBP11.66□□□□□ -0.54
TP53-209ENST00000504937 RHOT2Q8IXI1 618 aa11.66□□□□□ -0.54
TP53-209ENST00000504937 EIF1ADQ8N9N8 165 aaKnown RBP11.66□□□□□ -0.54
TP53-209ENST00000504937 TMEM174Q8WUU8 243 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms