RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PCDHGA11Q9Y5H2 935 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 USH1CQ9Y6N9 552 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CNTNAP4Q9C0A0 1308 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 PNMA6FA0A0J9YX94 578 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 RASSF10A6NK89 507 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 C2orf81A6NN90 581 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM47E-STBD1D6RA91 191 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CETN3O15182 167 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 TBC1D12O60347 775 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 TMCC2O75069 709 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CYP2C9P11712 490 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 MAN1A1P33908 653 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 EVI2BP34910 448 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 HSD17B4P51659 736 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ATP11AP98196 1134 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CBLBQ13191 982 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CTC1Q2NKJ3 1217 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 IGSF11Q5DX21 431 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CFAP157Q5JU67 520 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD20A2Q5SQ80 823 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD20A1Q5TYW2 823 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD20A3Q5VUR7 823 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 METTL21CQ5VZV1 264 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 METTL3Q86U44 580 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 GOT1L1Q8NHS2 421 aaPredicted RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ACTRT2Q8TDY3 377 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 U2AF1L4Q8WU68 220 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 FERD3LQ96RJ6 166 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 MPHOSPH6Q99547 160 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 PYM1Q9BRP8 204 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 SNX25Q9H3E2 840 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 VIPAS39Q9H9C1 493 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 DNAJC17Q9NVM6 304 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 FAIMQ9NVQ4 179 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 WDR70Q9NW82 654 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 GPRC5BQ9NZH0 403 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 LRWD1Q9UFC0 647 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 DPP7Q9UHL4 492 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 MTUS1Q9ULD2 1270 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 BCS1LQ9Y276 419 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 HEG1Q9ULI3 1381 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CDK5RAP2Q96SN8 1893 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF804BA4D1E1 1349 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF532Q9HCE3 1301 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 KDM3AQ9Y4C1 1321 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 USP17L12C9JPN9 530 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 USP17L21D6R901 530 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 H3BUI4 141 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CUTAO60888 179 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 DEXIO95424 95 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 TUBB4AP04350 444 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 RARBP10826 455 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 TCF3P15923 654 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ATICP31939 592 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 SCTRP47872 440 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 HARS2P49590 506 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 RAC1P63000 192 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CACNB1Q02641 598 aaPredicted RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 PPFIA1Q13136 1202 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 SEPT2Q15019 361 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC38Q502W7 563 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 SEL1L2Q5TEA6 688 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 NCAPH2Q6IBW4 605 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 SPOPLQ6IQ16 392 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 CASC4Q6P4E1 433 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF449Q6P9G9 518 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ASRGL1Q7L266 308 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 STRA8Q7Z7C7 330 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 PHLDB2Q86SQ0 1253 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 MAPKAPK5Q8IW41 473 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 ADGRG5Q8IZF4 528 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 PLBD2Q8NHP8 589 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 SREK1Q8WXA9 508 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 STARD8Q92502 1023 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 GPKOWQ92917 476 aaPredicted RBP eCLIP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 TOE1Q96GM8 510 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 MPP4Q96JB8 637 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 RILPQ96NA2 401 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 IMPG2Q9BZV3 1241 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 XAB2Q9HCS7 855 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 PIH1D1Q9NWS0 290 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 DNMT3BQ9UBC3 853 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 SALL4Q9UJQ4 1053 aa3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 UTP11Q9Y3A2 253 aaKnown RBP3.92□□□□□ -1.78
PCDH11X-208ENST00000504220 NUP98P52948 1817 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 C10orf71Q711Q0 1435 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 LRRC37AA6NMS7 1700 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 TTLL13PA6NNM8 815 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 RGS16O15492 202 aaPredicted RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 RPS6KA4O75676 772 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 SERPINB2P05120 415 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CD19P15391 556 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 CFL1P23528 166 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 GNA11P29992 359 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 RPS3AP61247 264 aaKnown RBP3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 NR5A1Q13285 461 aa3.91□□□□□ -1.78
PCDH11X-208ENST00000504220 ACAP1Q15027 740 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms