RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TEX101Q9BY14 249 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 MTG2Q9H4K7 406 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 NCOA5Q9HCD5 579 aaKnown RBP3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 TRIM39Q9HCM9 518 aa3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 USP15Q9Y4E8 981 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P17-201ENST00000504195 CCDC187A0A096LP49 1063 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 PTPDC1A2A3K4 754 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 WIPF3A6NGB9 483 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 TBKBP1A7MCY6 615 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 DVL2O14641 736 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 MGST3O14880 152 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 PLD2O14939 933 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 TP73O15350 636 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 INSIG1O15503 277 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 GLRX3O76003 335 aaKnown RBP3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 PRKCGP05129 697 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 WT1P19544 449 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 IGFALSP35858 605 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 FLT3P36888 993 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 PROK1P58294 105 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 TUBA4AP68366 448 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 SSBP2P81877 361 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 APBA1Q02410 837 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 RBL2Q08999 1139 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 SCAPQ12770 1279 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 MYBPC3Q14896 1274 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 MIDNQ504T8 468 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 C2orf27AQ580R0 203 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 MTX3Q5HYI7 312 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 KIAA1841Q6NSI8 718 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 BTNL9Q6UXG8 535 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 DLK2Q6UY11 383 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 USP43Q70EL4 1123 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 XYLT1Q86Y38 959 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 FAM43AQ8N2R8 423 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 C7orf31Q8N865 590 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 KIAA1958Q8N8K9 716 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 MKL1Q969V6 931 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 SOX7Q9BT81 388 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 CASS4Q9NQ75 786 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 TMEM74BQ9NUR3 256 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 ASB6Q9NWX5 421 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 FLRT1Q9NZU1 646 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 TBC1D30Q9Y2I9 924 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 MAP3K2Q9Y2U5 619 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 PTCH2Q9Y6C5 1203 aa3.08□□□□□ -1.92
HMGB3P17-201ENST00000504195 CCDC151A5D8V7 595 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 OPA1O60313 960 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 APOL3O95236 402 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 ASLP04424 464 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 CLEC2LP0C7M8 214 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 GPD1P21695 349 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 EIF2B5Q13144 721 aaKnown RBP3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 UBE2R2Q712K3 238 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 PIK3C3Q8NEB9 887 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 ZFP28Q8NHY6 868 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 BOD1Q96IK1 185 aa3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 REXO4Q9GZR2 422 aaKnown RBP3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 INTS7Q9NVH2 962 aaKnown RBP3.07□□□□□ -1.92
HMGB3P17-201ENST00000504195 PRPF6O94906 941 aaKnown RBP3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 RAPGEF3O95398 923 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 XPAP23025 273 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 PTX3P26022 381 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 CD69Q07108 199 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 FNDC3BQ53EP0 1204 aaKnown RBP3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 CCDC178Q5BJE1 867 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 AGAP9Q5VTM2 703 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 MAPKAPK5Q8IW41 473 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 RHOT2Q8IXI1 618 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 ZZZ3Q8IYH5 903 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 TMEM132CQ8N3T6 1108 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 TFAP2CQ92754 450 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 RPL36ALQ969Q0 106 aaKnown RBP3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 SARAFQ96BY9 339 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 C8orf37Q96NL8 207 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 CDC5LQ99459 802 aaKnown RBP3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 UNKLQ9H9P5 680 aaKnown RBP3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 GALNT9Q9HCQ5 603 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 MTMR4Q9NYA4 1195 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 ENTPD2Q9Y5L3 495 aa3.06□□□□□ -1.92
HMGB3P17-201ENST00000504195 IGKV2D-30A0A075B6S6 120 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 MANSC4A6NHS7 340 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 NRP2O60462 931 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 LY86O95711 162 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 SLC9A1P19634 815 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 GPR15P49685 360 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 LLGL1Q15334 1064 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 ETFDHQ16134 617 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 METRNLQ641Q3 311 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 KIAA1161Q6NSJ0 714 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 PDZD4Q76G19 769 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 SAMD14Q8IZD0 417 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 CDYL2Q8N8U2 506 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 PPP1R10Q96QC0 940 aaKnown RBP3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 ELF4Q99607 663 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 AIFM2Q9BRQ8 373 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 MYL10Q9BUA6 226 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 SEMA4CQ9C0C4 833 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 MTFR1LQ9H019 292 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms