RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NSUN2Q08J23 767 aaKnown RBP eCLIP17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 AP1B1Q10567 949 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 XKR3Q5GH77 459 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 TRMT10CQ7L0Y3 403 aaKnown RBP17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 KIF12Q96FN5 646 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 CENPKQ9BS16 269 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 AMACRQ9UHK6 382 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 STAT5BP51692 787 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 NR1I3Q14994 352 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 MORF4L2Q15014 288 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 TRIML2Q8N7C3 387 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 HIPK4Q8NE63 616 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 BTBD6Q96KE9 485 aa17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 OLA1Q9NTK5 396 aaKnown RBP17.51■□□□□ 0.39
PCDHA1-203ENST00000504120 FAM205CA6NFA0 338 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 PFDN1O60925 122 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 CCZ1BP86790 482 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 CCZ1P86791 482 aaPredicted RBP17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 NCAPHQ15003 741 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 EDRF1Q3B7T1 1238 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 NUDCD3Q8IVD9 361 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 CNPY4Q8N129 248 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 RASSF3Q86WH2 238 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 TNIP3Q96KP6 325 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 MAP3K14Q99558 947 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 APOL1O14791 398 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 ENTPD3O75355 529 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 ARSEP51690 589 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 FASTKD5Q7L8L6 764 aaKnown RBP17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 ALKBH8Q96BT7 664 aaKnown RBP17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 OTUD5Q96G74 571 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 PRKCBP05771 671 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 C16orf86Q6ZW13 317 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 RCOR2Q8IZ40 523 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 ANLNQ9NQW6 1124 aa17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.5■□□□□ 0.39
PCDHA1-203ENST00000504120 TMEM247A6NEH6 219 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 C1orf146Q5VVC0 180 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 E4F1Q66K89 784 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 KCTD17Q8N5Z5 321 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 CCNYL1Q8N7R7 359 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 RNF149Q8NC42 400 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 N4BP2L2Q92802 583 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 CHP1Q99653 195 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 REEP2Q9BRK0 252 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 KITP10721 976 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 FMO5P49326 533 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 CDR2Q01850 454 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 NAA30Q147X3 362 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 HPS3Q969F9 1004 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 LRRC1Q9BTT6 524 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 DCTN4Q9UJW0 460 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 NDUFB10O96000 172 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 VSNL1P62760 191 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 NME3Q13232 169 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 STILQ15468 1287 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 TKFCQ3LXA3 575 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 WDR35Q9P2L0 1181 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 JCADQ9P266 1359 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 STXBP3O00186 592 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 PPP1R12AO14974 1030 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 ARHGDIAP52565 204 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 COG2Q14746 738 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 HIF1AQ16665 826 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 VIPAS39Q9H9C1 493 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 KDM6AO15550 1401 aaPredicted RBP17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 UCHL3P15374 230 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 ANTXR2P58335 489 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 KRT33BQ14525 404 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 HHIPL2Q6UWX4 724 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 LCA5Q86VQ0 697 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 NCLNQ969V3 563 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 SP110Q9HB58 689 aa17.49■□□□□ 0.39
PCDHA1-203ENST00000504120 ITSN1Q15811 1721 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 TEX2Q8IWB9 1127 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 ELMOD1Q8N336 334 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 CD163L1Q9NR16 1453 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 NCOA3Q9Y6Q9 1424 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 CFAP73A6NFT4 308 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 HMGCS2P54868 508 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 POLE2P56282 527 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 SLC35G2Q8TBE7 412 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 PDCD6IPQ8WUM4 868 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 ZNF668Q96K58 619 aaPredicted RBP17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 CCDC195A0A1B0GUA6 201 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 H0Y3Z8 333 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 CCDC22O60826 627 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 CDC42EP1Q00587 391 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 POU5F1BQ06416 359 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 BYSLQ13895 437 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 MXD4Q14582 209 aaPredicted RBP17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 C18orf8Q96DM3 657 aa17.48■□□□□ 0.39
PCDHA1-203ENST00000504120 NDE1Q9NXR1 346 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms