RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 EXOC7Q9UPT5 735 aa18.03■□□□□ 0.48
SCLT1-205ENST00000503401 GIT1Q9Y2X7 761 aa18.03■□□□□ 0.48
SCLT1-205ENST00000503401 PCDHA5Q9Y5H7 936 aa18.03■□□□□ 0.48
SCLT1-205ENST00000503401 PRUNE2Q8WUY3 3088 aa18.03■□□□□ 0.48
SCLT1-205ENST00000503401 ZMYM2Q9UBW7 1377 aa18.03■□□□□ 0.48
SCLT1-205ENST00000503401 GOLGA6L22H0YM25 854 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 RFXAPO00287 272 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 EIF3DO15371 548 aaKnown RBP eCLIP18.02■□□□□ 0.48
SCLT1-205ENST00000503401 RHOBTB3O94955 611 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 ADSSP30520 456 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 PBX3P40426 434 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 GRM5P41594 1212 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 GRIN2CQ14957 1233 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 DEFB123Q8N688 67 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 GSTCDQ8NEC7 633 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 ZNF507Q8TCN5 953 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 CCDC47Q96A33 483 aaKnown RBP18.02■□□□□ 0.48
SCLT1-205ENST00000503401 UBN1Q9NPG3 1134 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 PLAGL2Q9UPG8 496 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 MAPK8IP1Q9UQF2 711 aa18.02■□□□□ 0.48
SCLT1-205ENST00000503401 A0A0B4J269 797 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 B4GALT3O60512 393 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 CTNNB1P35222 781 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 TNFSF9P41273 254 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 ERVK-21P61565 698 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 RNASELQ05823 741 aaKnown RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 PSMD2Q13200 908 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 KCNB1Q14721 858 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 ZNF280BQ86YH2 543 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 SMYD4Q8IYR2 804 aaPredicted RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 ZSWIM2Q8NEG5 633 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 URGCPQ8TCY9 931 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 POMGNT1Q8WZA1 660 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 CLP1Q92989 425 aaKnown RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 SMARCE1Q969G3 411 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 CCDC94Q9BW85 323 aaPredicted RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 TMEM206Q9H813 350 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 HOOK1Q9UJC3 728 aaKnown RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 TMEM265A0A087WTH1 108 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 MEFVO15553 781 aaPredicted RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 FAM189A1O60320 539 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 COL4A4P53420 1690 aaPredicted RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 EPC2Q52LR7 807 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 GLRA4Q5JXX5 417 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 ISM2Q6H9L7 571 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 GPT2Q8TD30 523 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 ACAP3Q96P50 834 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 CBWD1Q9BRT8 395 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 MRPL9Q9BYD2 267 aaKnown RBP18.01■□□□□ 0.47
SCLT1-205ENST00000503401 PRDM12Q9H4Q4 367 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 PCIF1Q9H4Z3 704 aa18.01■□□□□ 0.47
SCLT1-205ENST00000503401 UBE4BO95155 1302 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 ZC3H11AO75152 810 aaKnown RBP eCLIP18■□□□□ 0.47
SCLT1-205ENST00000503401 DDHD2O94830 711 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 SMC2O95347 1197 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 CXCL8P10145 99 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 ACOT2P49753 483 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 BMT2Q1RMZ1 405 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 ELOA2Q8IYF1 753 aaPredicted RBP18■□□□□ 0.47
SCLT1-205ENST00000503401 SPATA20Q8TB22 786 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 RPS6KC1Q96S38 1066 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 NRDE2Q9H7Z3 1164 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 DNAJB4Q9UDY4 337 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 AGO2Q9UKV8 859 aaKnown RBP18■□□□□ 0.47
SCLT1-205ENST00000503401 STYXL1Q9Y6J8 313 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 ANK1P16157 1881 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 PDCD11Q14690 1871 aaKnown RBP18■□□□□ 0.47
SCLT1-205ENST00000503401 PLXNA4Q9HCM2 1894 aa18■□□□□ 0.47
SCLT1-205ENST00000503401 PTGESO14684 152 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 OGTO15294 1046 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 TGFB1I1O43294 461 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 BMPR1AP36894 532 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 YARSP54577 528 aaKnown RBP17.99■□□□□ 0.47
SCLT1-205ENST00000503401 SLFN12LQ6IEE8 588 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 GDPD5Q8WTR4 605 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 NOC3LQ8WTT2 800 aaKnown RBP17.99■□□□□ 0.47
SCLT1-205ENST00000503401 SAAL1Q96ER3 474 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 GSDMAQ96QA5 445 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 CACNG4Q9UBN1 327 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
SCLT1-205ENST00000503401 GOLGA8IPA6NC78 632 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 GOLGA8JA6NMD2 632 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 NT5C1B-RDH14C9J2C7 533 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 CLIC2O15247 247 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 INPPL1O15357 1258 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 KNOP1Q1ED39 458 aaKnown RBP17.98■□□□□ 0.47
SCLT1-205ENST00000503401 SLC10A6Q3KNW5 377 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 ARMCX5Q6P1M9 558 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 COLGALT1Q8NBJ5 622 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 FBXO22Q8NEZ5 403 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 SNX27Q96L92 541 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 FAM193BQ96PV7 902 aaPredicted RBP17.98■□□□□ 0.47
SCLT1-205ENST00000503401 RMND1Q9NWS8 449 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 KANSL3Q9P2N6 904 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 MAN1B1Q9UKM7 699 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 TULP1O00294 542 aaPredicted RBP17.98■□□□□ 0.47
SCLT1-205ENST00000503401 BIN1O00499 593 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 CSPG5O95196 566 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 CLTAP09496 248 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms