RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 TBC1D13Q9NVG8 400 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
CPNE1-228ENST00000498814 PDCD11Q14690 1871 aaKnown RBP17.01■□□□□ 0.31
CPNE1-228ENST00000498814 TISP43B9A030 160 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 C5orf67F2Z3F1 127 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 OGTO15294 1046 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 RB1P06400 928 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 HARSP12081 509 aaKnown RBP17■□□□□ 0.31
CPNE1-228ENST00000498814 LAG3P18627 525 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 HOXD13P35453 343 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 AFF1P51825 1210 aaKnown RBP17■□□□□ 0.31
CPNE1-228ENST00000498814 STK4Q13043 487 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 THNSL1Q8IYQ7 743 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 KIAA0895Q8NCT3 520 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 GSTCDQ8NEC7 633 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 SPATA20Q8TB22 786 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 ARNTL2Q8WYA1 636 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 ZFP42Q96MM3 310 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 FAM161BQ96MY7 647 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 ACAP3Q96P50 834 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 GSDMAQ96QA5 445 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 PLVAPQ9BX97 442 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 IKZF4Q9H2S9 585 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 CERS4Q9HA82 394 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 AAASQ9NRG9 546 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 TOPORSQ9NS56 1045 aaPredicted RBP17■□□□□ 0.31
CPNE1-228ENST00000498814 KLK14Q9P0G3 267 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 HCSTQ9UBK5 93 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 MTUS1Q9ULD2 1270 aa17■□□□□ 0.31
CPNE1-228ENST00000498814 GOLGA6L22H0YM25 854 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 FAM189A1O60320 539 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 SMC2O95347 1197 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 POMCP01189 267 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 CLTAP09496 248 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 ADSSP30520 456 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 CTNNB1P35222 781 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
CPNE1-228ENST00000498814 OSTNP61366 133 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 RNASELQ05823 741 aaKnown RBP16.99■□□□□ 0.31
CPNE1-228ENST00000498814 SPOUT1Q5T280 376 aaKnown RBP16.99■□□□□ 0.31
CPNE1-228ENST00000498814 ALKAL1Q6UXT8 129 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 FBXO22Q8NEZ5 403 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 RPS6KC1Q96S38 1066 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 MSTO1Q9BUK6 570 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 RMND1Q9NWS8 449 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 MIOSQ9NXC5 875 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 MTMR10Q9NXD2 777 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 PCDHB12Q9Y5F1 795 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 COL4A4P53420 1690 aaPredicted RBP16.99■□□□□ 0.31
CPNE1-228ENST00000498814 ANK1P16157 1881 aa16.99■□□□□ 0.31
CPNE1-228ENST00000498814 CDH23Q9H251 3354 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 EPOPA6NHQ4 379 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 GARTP22102 1010 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 SCNN1GP51170 649 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 SNRPFP62306 86 aaKnown RBP16.98■□□□□ 0.31
CPNE1-228ENST00000498814 GRIK3Q13003 919 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 XKR4Q5GH76 650 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 COLGALT1Q8NBJ5 622 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 POMGNT1Q8WZA1 660 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 P2RX5Q93086 422 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 PRDM12Q9H4Q4 367 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 NRDE2Q9H7Z3 1164 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
CPNE1-228ENST00000498814 PCDHA5Q9Y5H7 936 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 PLXNA4Q9HCM2 1894 aa16.98■□□□□ 0.31
CPNE1-228ENST00000498814 H3BNC9 293 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 PTGESO14684 152 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 TGFB1I1O43294 461 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 DDHD2O94830 711 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 DSC1Q08554 894 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
CPNE1-228ENST00000498814 SEZ6Q53EL9 994 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 KCNT2Q6UVM3 1135 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 SNX27Q96L92 541 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 FAM193BQ96PV7 902 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-228ENST00000498814 TMEM175Q9BSA9 504 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 C11orf84Q9BUA3 381 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-228ENST00000498814 CXCL16Q9H2A7 254 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 PLEKHA5Q9HAU0 1116 aa16.97■□□□□ 0.31
CPNE1-228ENST00000498814 CGNQ9P2M7 1197 aaKnown RBP16.97■□□□□ 0.31
CPNE1-228ENST00000498814 CPSF3Q9UKF6 684 aaKnown RBP16.97■□□□□ 0.31
CPNE1-228ENST00000498814 KIAA0391O15091 583 aaKnown RBP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 B4GALT3O60512 393 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 ZC3H11AO75152 810 aaKnown RBP eCLIP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 KIF20AO95235 890 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 LDHAP00338 332 aaKnown RBP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 THP07101 528 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 ADRB2P07550 413 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 KCNE1P15382 129 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 PPM1AP35813 382 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 TNFSF9P41273 254 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms