RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 LACTBP83111 547 aaPredicted RBP6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 RBM10P98175 930 aaKnown RBP6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 NUCB1Q02818 461 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 INPP5AQ14642 412 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 FAM110CQ1W6H9 321 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 PRSS36Q5K4E3 855 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 ZMYM1Q5SVZ6 1142 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 HYIQ5T013 277 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 C12orf60Q5U649 245 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 LRFN4Q6PJG9 635 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 CYFIP1Q7L576 1253 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 FGD2Q7Z6J4 655 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 C12orf40Q86WS4 652 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 ZNF227Q86WZ6 799 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 MIGA1Q8NAN2 632 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 KCT2Q8NC54 265 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 SKA1Q96BD8 255 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 PLPPR2Q96GM1 343 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 CCDC17Q96LX7 622 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 ORAI3Q9BRQ5 295 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 KIAA1683Q9H0B3 1180 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 ARPP21Q9UBL0 812 aaPredicted RBP6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 MORF4L1Q9UBU8 362 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 MRFAP1Q9Y605 127 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 ZHX2Q9Y6X8 837 aa6.77□□□□□ -1.33
TMEM39A-212ENST00000497993 MYPNQ86TC9 1320 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 LRRC37A2A6NM11 1700 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 ABHD14A-ACY1A0A1B0GW23 586 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 PDHXO00330 501 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 RNF113AO15541 343 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 EPB41L2O43491 1005 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 RNGTTO60942 597 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 ULK1O75385 1050 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 MBD4O95243 580 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 CFBP00751 764 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 C6orf222P0C671 652 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 RAG1P15918 1043 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 CAPN2P17655 700 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 GCLCP48506 637 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 NT5C2P49902 561 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 PLCD1P51178 756 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 PMS1P54277 932 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 KRT85P78386 507 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 ARHGEF6Q15052 776 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 PPM1JQ5JR12 505 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 TMEM201Q5SNT2 666 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 ZBTB37Q5TC79 503 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 HEATR6Q6AI08 1181 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 SEZ6L2Q6UXD5 910 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 SRLQ86TD4 932 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 CBARPQ8N350 705 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 GIMAP7Q8NHV1 300 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 PTPRN2Q92932 1015 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 YTHDC1Q96MU7 727 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 RWDD1Q9H446 243 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 PTPN22Q9Y2R2 807 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 RABGAP1Q9Y3P9 1069 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 CORINQ9Y5Q5 1042 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 DGKBQ9Y6T7 804 aa6.76□□□□□ -1.33
TMEM39A-212ENST00000497993 TRIOBPQ9H2D6 2365 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 F5H423 210 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 NOP56O00567 594 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 GPAA1O43292 621 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 MT-CO1P00395 513 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 ASGR2P07307 311 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 NOVP48745 357 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 RENBPP51606 427 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 USP14P54578 494 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 OCRLQ01968 901 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 SPP2Q13103 211 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 KLF1Q13351 362 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 ALX1Q15699 326 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 INAVAQ3KP66 663 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 ATP13A4Q4VNC1 1196 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 PIK3R6Q5UE93 754 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 TMEM179Q6ZVK1 233 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 MAMDC2Q7Z304 686 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 CATIPQ7Z7H3 387 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 DDX53Q86TM3 631 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 MYLK4Q86YV6 388 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 ZNF507Q8TCN5 953 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 SDR42E1Q8WUS8 393 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 ISL2Q96A47 359 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 HSPBAP1Q96EW2 488 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 LRGUKQ96M69 825 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 ARMT1Q9H993 441 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 EPB41L4AQ9HCS5 686 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 SSU72Q9NP77 194 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 ANLNQ9NQW6 1124 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 MCM9Q9NXL9 1143 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 KLHL3Q9UH77 587 aa6.75□□□□□ -1.33
TMEM39A-212ENST00000497993 KIAA1217Q5T5P2 1943 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 BAZ2BQ9UIF8 2168 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 IGKV6D-41A0A0C4DH26 115 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 TCRBV16S1A1N1A0A5B0 115 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 DYTNA2CJ06 578 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 M0R2C6 588 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 PRKAB2O43741 272 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 IL33O95760 270 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms