RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 ARNTL2Q8WYA1 636 aa17.73■□□□□ 0.43
FAM3A-220ENST00000497506 SAMD11Q96NU1 681 aa17.73■□□□□ 0.43
FAM3A-220ENST00000497506 CXCL16Q9H2A7 254 aa17.73■□□□□ 0.43
FAM3A-220ENST00000497506 KLK14Q9P0G3 267 aa17.73■□□□□ 0.43
FAM3A-220ENST00000497506 MTUS1Q9ULD2 1270 aa17.73■□□□□ 0.43
FAM3A-220ENST00000497506 GDAQ9Y2T3 454 aa17.73■□□□□ 0.43
FAM3A-220ENST00000497506 CITO14578 2027 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 MEFVO15553 781 aaPredicted RBP17.72■□□□□ 0.43
FAM3A-220ENST00000497506 FAM189A1O60320 539 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 B4GALT3O60512 393 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 POMCP01189 267 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 ADSSP30520 456 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 BMPR1AP36894 532 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 MATR3P43243 847 aaKnown RBP eCLIP17.72■□□□□ 0.43
FAM3A-220ENST00000497506 OSTNP61366 133 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 BMT2Q1RMZ1 405 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 EPC2Q52LR7 807 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 SEZ6Q53EL9 994 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 SYCP3Q8IZU3 236 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 SPATA20Q8TB22 786 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 URGCPQ8TCY9 931 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
FAM3A-220ENST00000497506 TMEM206Q9H813 350 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 MTMR10Q9NXD2 777 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 UBE4BO95155 1302 aa17.72■□□□□ 0.43
FAM3A-220ENST00000497506 COL4A4P53420 1690 aaPredicted RBP17.71■□□□□ 0.43
FAM3A-220ENST00000497506 C5orf67F2Z3F1 127 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 RFXAPO00287 272 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 OGTO15294 1046 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 DDHD2O94830 711 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 CTNNB1P35222 781 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 SCNN1GP51170 649 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 SLFN12LQ6IEE8 588 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 ZNF280BQ86YH2 543 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 COLGALT1Q8NBJ5 622 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 ERCC4Q92889 916 aaPredicted RBP17.71■□□□□ 0.43
FAM3A-220ENST00000497506 CCDC47Q96A33 483 aaKnown RBP17.71■□□□□ 0.43
FAM3A-220ENST00000497506 ACAP3Q96P50 834 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 MSTO1Q9BUK6 570 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 PRDM12Q9H4Q4 367 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 NRDE2Q9H7Z3 1164 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 KANSL3Q9P2N6 904 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 HOOK1Q9UJC3 728 aaKnown RBP17.71■□□□□ 0.43
FAM3A-220ENST00000497506 RWDD3Q9Y3V2 267 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 PCDHA5Q9Y5H7 936 aa17.71■□□□□ 0.43
FAM3A-220ENST00000497506 PTGESO14684 152 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 TGFB1I1O43294 461 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 RB1P06400 928 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 RNASELQ05823 741 aaKnown RBP17.7■□□□□ 0.42
FAM3A-220ENST00000497506 XKR4Q5GH76 650 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 ZBTB41Q5SVQ8 909 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 SPOUT1Q5T280 376 aaKnown RBP17.7■□□□□ 0.42
FAM3A-220ENST00000497506 ALKAL1Q6UXT8 129 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 NELFCDQ8IXH7 590 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 FBXO22Q8NEZ5 403 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 GUCD1Q96NT3 240 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 GSDMAQ96QA5 445 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 DNAJB4Q9UDY4 337 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 PLAGL2Q9UPG8 496 aa17.7■□□□□ 0.42
FAM3A-220ENST00000497506 PDCD11Q14690 1871 aaKnown RBP17.69■□□□□ 0.42
FAM3A-220ENST00000497506 H3BNC9 293 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 LPXNO60711 386 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 SMC2O95347 1197 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 CLTAP09496 248 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 LAG3P18627 525 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 GARTP22102 1010 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 TNFSF9P41273 254 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 DSC1Q08554 894 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 NAB2Q15742 525 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 SLC10A6Q3KNW5 377 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 KCNT2Q6UVM3 1135 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 POMGNT1Q8WZA1 660 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 SNX27Q96L92 541 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 RPS6KC1Q96S38 1066 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 CDX2Q99626 313 aaPredicted RBP17.69■□□□□ 0.42
FAM3A-220ENST00000497506 PLVAPQ9BX97 442 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 GBP3Q9H0R5 595 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 AAASQ9NRG9 546 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 TOPORSQ9NS56 1045 aaPredicted RBP17.69■□□□□ 0.42
FAM3A-220ENST00000497506 CPSF3Q9UKF6 684 aaKnown RBP17.69■□□□□ 0.42
FAM3A-220ENST00000497506 AGO2Q9UKV8 859 aaKnown RBP17.69■□□□□ 0.42
FAM3A-220ENST00000497506 PLXNA4Q9HCM2 1894 aa17.69■□□□□ 0.42
FAM3A-220ENST00000497506 ZC3H11AO75152 810 aaKnown RBP eCLIP17.68■□□□□ 0.42
FAM3A-220ENST00000497506 ANK1P16157 1881 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 PBX3P40426 434 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 YARSP54577 528 aaKnown RBP17.68■□□□□ 0.42
FAM3A-220ENST00000497506 BCAR1P56945 870 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 GRIK3Q13003 919 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
FAM3A-220ENST00000497506 KYAT1Q16773 422 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 KNOP1Q1ED39 458 aaKnown RBP17.68■□□□□ 0.42
FAM3A-220ENST00000497506 CRELD2Q6UXH1 353 aaPredicted RBP17.68■□□□□ 0.42
FAM3A-220ENST00000497506 COLGALT2Q8IYK4 626 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 KLHL23Q8NBE8 558 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 ZSWIM2Q8NEG5 633 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 P2RX5Q93086 422 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 SMARCE1Q969G3 411 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 ZNF558Q96NG5 402 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 CBWD1Q9BRT8 395 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms