RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 TXKP42681 527 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 ACAD11Q709F0 780 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 NLRP9Q7RTR0 991 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 PNMA1Q8ND90 353 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 SNX29Q8TEQ0 813 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 MKL1Q969V6 931 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 PTCD3Q96EY7 689 aaKnown RBP13.85□□□□□ -0.19
VEGFA-215ENST00000497139 SMC6Q96SB8 1091 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 SYT11Q9BT88 431 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 IQCGQ9H095 443 aaKnown RBP13.85□□□□□ -0.19
VEGFA-215ENST00000497139 MAD2L2Q9UI95 211 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 WDR37Q9Y2I8 494 aa13.85□□□□□ -0.19
VEGFA-215ENST00000497139 SLC16A3O15427 465 aaKnown RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 THAP12O43422 761 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 NMT2O60551 498 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 GAS8O95995 478 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 RGS2P41220 211 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 RPL26P61254 145 aaKnown RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 DNAJC3Q13217 504 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 HNRNPDQ14103 355 aaKnown RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 SBK1Q52WX2 424 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 MCUR1Q96AQ8 359 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 DDX27Q96GQ7 796 aaKnown RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 SNF8Q96H20 258 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 TTC25Q96NG3 672 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 KDM3AQ9Y4C1 1321 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 CYP2D7A0A087X1C5 515 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ESYT2A0FGR8 921 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 SMIM22K7EJ46 135 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 UBTFL6P0CB48 400 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 TROVE2P10155 538 aaKnown RBP eCLIP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 NR2F2P24468 414 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 SOX5P35711 763 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 RAP1GDS1P52306 607 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 TMED1Q13445 227 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ZC2HC1CQ53FD0 456 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 HYIQ5T013 277 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 PHLDB2Q86SQ0 1253 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 SPATA24Q86W54 205 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 TDRPQ86YL5 185 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 SCFD1Q8WVM8 642 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 GFM2Q969S9 779 aaKnown RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ZNF653Q96CK0 615 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ARPP21Q9UBL0 812 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ZMYM2Q9UBW7 1377 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 SSX2IPQ9Y2D8 614 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ALG6Q9Y672 507 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 A0A1W2PRG0 241 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 RASA4BC9J798 803 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ANKRD63C9JTQ0 380 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 GYG2O15488 501 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 RASA4O43374 803 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 EXOC3O60645 756 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 VAV1P15498 845 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 YY1P25490 414 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 KRT72Q14CN4 511 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 R3HDM1Q15032 1099 aaKnown RBP13.84□□□□□ -0.19
VEGFA-215ENST00000497139 DNAAF5Q86Y56 855 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 NSL1Q96IY1 281 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 TUBGCP5Q96RT8 1024 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ECSITQ9BQ95 431 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 FOXP3Q9BZS1 431 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 PPCSQ9HAB8 311 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 ZDHHC7Q9NXF8 308 aa13.84□□□□□ -0.19
VEGFA-215ENST00000497139 KIAA1551Q9HCM1 1747 aa13.83□□□□□ -0.19
VEGFA-215ENST00000497139 IGSF9BQ9UPX0 1349 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 FAM196BA6NMK8 535 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 USP17L21D6R901 530 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 RAD21O60216 631 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 SORBS3O60504 671 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 DNAJC6O75061 913 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 HAUS5O94927 633 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 NAPAP54920 295 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
VEGFA-215ENST00000497139 KYNUQ16719 465 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 KCTD19Q17RG1 926 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-215ENST00000497139 FAM91A1Q658Y4 838 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-215ENST00000497139 CYP4X1Q8N118 509 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 TBCKQ8TEA7 893 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 STK33Q9BYT3 514 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
VEGFA-215ENST00000497139 TP73O15350 636 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 MAGEC1O60732 1142 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 CLCN2P51788 898 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 BPIFB4P59827 614 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 MAP3K10Q02779 954 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 GRM2Q14416 872 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 KBTBD2Q8IY47 623 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 BBOF1Q8ND07 529 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 MAML1Q92585 1016 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 NINJ2Q9NZG7 142 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 TMOD4Q9NZQ9 345 aa13.83□□□□□ -0.2
VEGFA-215ENST00000497139 hCG_1984214I3L0E3 225 aa13.82□□□□□ -0.2
VEGFA-215ENST00000497139 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
VEGFA-215ENST00000497139 HPCAP84074 193 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms