RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 LRRC55Q6ZSA7 311 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 RHOUQ7L0Q8 258 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 LDLRAD3Q86YD5 345 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 OR10H5Q8NGA6 315 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 PROKR1Q8TCW9 393 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 UHRF1Q96T88 793 aaPredicted RBP7.33□□□□□ -1.24
MDM2-220ENST00000496959 MENTQ9BUN1 341 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 ADI1Q9BV57 179 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 IKZF4Q9H2S9 585 aa7.33□□□□□ -1.24
MDM2-220ENST00000496959 LEFTY2O00292 366 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 ADCY6O43306 1168 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 NHLH2Q02577 135 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 MFSD14BQ5SR56 506 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 KCNV1Q6PIU1 500 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 COG1Q8WTW3 980 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 ZNF768Q9H5H4 540 aaKnown RBP7.32□□□□□ -1.24
MDM2-220ENST00000496959 SPC25Q9HBM1 224 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 CCM2LQ9NUG4 571 aaPredicted RBP7.32□□□□□ -1.24
MDM2-220ENST00000496959 SCOCQ9UIL1 159 aa7.32□□□□□ -1.24
MDM2-220ENST00000496959 RNASET2O00584 256 aaKnown RBP7.31□□□□□ -1.24
MDM2-220ENST00000496959 PJA2O43164 708 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 RAMP2O60895 175 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 SNRPA1P09661 255 aaKnown RBP7.31□□□□□ -1.24
MDM2-220ENST00000496959 SPATA31D3P0C874 917 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 CLRN1P58418 232 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 RNASE9P60153 205 aaKnown RBP7.31□□□□□ -1.24
MDM2-220ENST00000496959 MALLQ13021 153 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 LAIR1Q6GTX8 287 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 SPATA31D4Q6ZUB0 917 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 Q6ZVL8 140 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 ZNF572Q7Z3I7 529 aaPredicted RBP7.31□□□□□ -1.24
MDM2-220ENST00000496959 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
MDM2-220ENST00000496959 REPS2Q8NFH8 660 aa7.31□□□□□ -1.24
MDM2-220ENST00000496959 GAGE12BA1L429 117 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 GAGE12HA6NDE8 117 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 PTTG1IPP53801 180 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 ERVK-21P61565 698 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 SP140Q13342 867 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 CSRP2Q16527 193 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 ATXN7L2Q5T6C5 722 aaPredicted RBP7.3□□□□□ -1.24
MDM2-220ENST00000496959 MBNL2Q5VZF2 373 aaKnown RBP7.3□□□□□ -1.24
MDM2-220ENST00000496959 PLXDC1Q8IUK5 500 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 SYT12Q8IV01 421 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 AMOTL1Q8IY63 956 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 RPUSD2Q8IZ73 545 aaKnown RBP7.3□□□□□ -1.24
MDM2-220ENST00000496959 PQLC1Q8N2U9 271 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 RNF169Q8NCN4 708 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 MYEOVQ96EZ4 313 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 TTPALQ9BTX7 342 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 FAM126AQ9BYI3 521 aaPredicted RBP7.3□□□□□ -1.24
MDM2-220ENST00000496959 PHLDB1Q86UU1 1377 aa7.3□□□□□ -1.24
MDM2-220ENST00000496959 CXorf49A8MYA2 514 aaPredicted RBP7.29□□□□□ -1.24
MDM2-220ENST00000496959 K7ESF4 209 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 FOXN1O15353 648 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 ENDOD1O94919 500 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 OSMP13725 252 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 IL2RBP14784 551 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 GSPT1P15170 499 aaKnown RBP7.29□□□□□ -1.24
MDM2-220ENST00000496959 POU3F3P20264 500 aaPredicted RBP7.29□□□□□ -1.24
MDM2-220ENST00000496959 SREBF1P36956 1147 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 MCAMP43121 646 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 MTNR1BP49286 362 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 NOMO1Q15155 1222 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 CRB2Q5IJ48 1285 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 RRP12Q5JTH9 1297 aaKnown RBP7.29□□□□□ -1.24
MDM2-220ENST00000496959 RNF187Q5TA31 235 aaPredicted RBP7.29□□□□□ -1.24
MDM2-220ENST00000496959 SLC35B2Q8TB61 432 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 MLST8Q9BVC4 326 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 SENP6Q9GZR1 1112 aaPredicted RBP7.29□□□□□ -1.24
MDM2-220ENST00000496959 AKIP1Q9NQ31 210 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 LANCL2Q9NS86 450 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 MOCS1Q9NZB8 636 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 CHST2Q9Y4C5 530 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 PCDHGA2Q9Y5H1 932 aa7.29□□□□□ -1.24
MDM2-220ENST00000496959 IGSF3O75054 1194 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 ZSCAN20P17040 1043 aaPredicted RBP7.28□□□□□ -1.24
MDM2-220ENST00000496959 KRT4P19013 534 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 FAM189BP81408 668 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 PPP3CAQ08209 521 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 KLF1Q13351 362 aaPredicted RBP7.28□□□□□ -1.24
MDM2-220ENST00000496959 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
MDM2-220ENST00000496959 PUS7LQ9H0K6 701 aaKnown RBP7.28□□□□□ -1.24
MDM2-220ENST00000496959 DMRT3Q9NQL9 472 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 SLC5A4Q9NY91 659 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 GPR45Q9Y5Y3 372 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 HS3ST4Q9Y661 456 aa7.28□□□□□ -1.24
MDM2-220ENST00000496959 NCR1O76036 304 aa7.27□□□□□ -1.25
MDM2-220ENST00000496959 HLA-DOAP06340 250 aa7.27□□□□□ -1.25
MDM2-220ENST00000496959 ALOX15P16050 662 aaPredicted RBP7.27□□□□□ -1.25
MDM2-220ENST00000496959 Q6ZPA2 131 aa7.27□□□□□ -1.25
MDM2-220ENST00000496959 FBXO18Q8NFZ0 1043 aa7.27□□□□□ -1.25
MDM2-220ENST00000496959 TMEM140Q9NV12 185 aa7.27□□□□□ -1.25
MDM2-220ENST00000496959 C11orf21Q9P2W6 132 aa7.27□□□□□ -1.25
MDM2-220ENST00000496959 DNM3Q9UQ16 869 aa7.27□□□□□ -1.25
MDM2-220ENST00000496959 USP15Q9Y4E8 981 aaPredicted RBP7.27□□□□□ -1.25
MDM2-220ENST00000496959 ATRNL1Q5VV63 1379 aa7.26□□□□□ -1.25
MDM2-220ENST00000496959 CENPVL1A0A0U1RR11 272 aa7.26□□□□□ -1.25
MDM2-220ENST00000496959 TMEM200CA6NKL6 621 aa7.26□□□□□ -1.25
MDM2-220ENST00000496959 DRGXA6NNA5 263 aa7.26□□□□□ -1.25
MDM2-220ENST00000496959 FAM171A2A8MVW0 826 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms