RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	EFCAB12	Q6NXP0	572 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	C11orf74	Q86VG3	221 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	PLXDC1	Q8IUK5	500 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	REPS2	Q8NFH8	660 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	LEO1	Q8WVC0	666 aa	Predicted RBP	3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	EAF2	Q96CJ1	260 aa	Predicted RBP	3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	COQ10A	Q96MF6	247 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	R3HDML	Q9H3Y0	253 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	USP35	Q9P2H5	1018 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	EDAR	Q9UNE0	448 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	MAP3K2	Q9Y2U5	619 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	NOC2L	Q9Y3T9	749 aa	Known RBP	3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	PNPLA7	Q6ZV29	1317 aa		3.59	□□□□□ -1.83
RAD50-208	ENST00000496204	UNC119B	A6NIH7	251 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	DRGX	A6NNA5	263 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	NEMP1	O14524	444 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	PDE8A	O60658	829 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	SPDEF	O95238	335 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	ELANE	P08246	267 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	CRHR1	P34998	444 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	USP14	P54578	494 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	TP53BP2	Q13625	1128 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	FSCN1	Q16658	493 aa	Known RBP	3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	ATP13A4	Q4VNC1	1196 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	AGAP9	Q5VTM2	703 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204		Q6ZVL8	140 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	ADGRG3	Q86Y34	549 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	CMTR2	Q8IYT2	770 aa	Known RBP	3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	FAM98A	Q8NCA5	519 aa	Known RBP	3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	CLRN3	Q8NCR9	226 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	TSPEAR	Q8WU66	669 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	ZNF480	Q8WV37	535 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	ASB10	Q8WXI3	467 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	TFAP2C	Q92754	450 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	KCNG1	Q9UIX4	513 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	USP15	Q9Y4E8	981 aa	Predicted RBP	3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	RPTOR	Q8N122	1335 aa		3.58	□□□□□ -1.84
RAD50-208	ENST00000496204	CXorf49	A8MYA2	514 aa	Predicted RBP	3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	RAB11FIP3	O75154	756 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	CFI	P05156	583 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	ALOX15	P16050	662 aa	Predicted RBP	3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	DDX6	P26196	483 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	MGAT1	P26572	445 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	MPL	P40238	635 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	FLT3LG	P49771	235 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	CHN2	P52757	468 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	GUCY1B3	Q02153	619 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	DHCR24	Q15392	516 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	UGT8	Q16880	541 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	PRR16	Q569H4	304 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	FAM47A	Q5JRC9	791 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	ZNF572	Q7Z3I7	529 aa	Predicted RBP	3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	RNF180	Q86T96	592 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	CMIP	Q8IY22	773 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	TRMT2A	Q8IZ69	625 aa	Known RBP	3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	LCORL	Q8N3X6	602 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	SALL3	Q9BXA9	1300 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	POGK	Q9P215	609 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	PTGFRN	Q9P2B2	879 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	DPP7	Q9UHL4	492 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	SCOC	Q9UIL1	159 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	MAPRE3	Q9UPY8	281 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	COX11	Q9Y6N1	276 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	FPGT-TNNI3K	V9GXZ4	949 aa		3.57	□□□□□ -1.84
RAD50-208	ENST00000496204	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	CCDC78	A2IDD5	438 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	MASP2	O00187	686 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	ENPP3	O14638	875 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	PJA2	O43164	708 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	HKR1	P10072	659 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	MYCLP1	P12525	358 aa	Predicted RBP	3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	ENPP1	P22413	925 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	C21orf58	P58505	322 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	REST	Q13127	1097 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	ABHD17B	Q5VST6	288 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	B3GNTL1	Q67FW5	361 aa	Predicted RBP	3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	STRA8	Q7Z7C7	330 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	THNSL2	Q86YJ6	484 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	RHOT2	Q8IXI1	618 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	SIMC1	Q8NDZ2	872 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	SUPT20H	Q8NEM7	779 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	ZFP28	Q8NHY6	868 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	HOXB13	Q92826	284 aa	Predicted RBP	3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	FUBP1	Q96AE4	644 aa	Known RBP	3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	ORAI2	Q96SN7	254 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	KLHL11	Q9NVR0	708 aa		3.56	□□□□□ -1.84
RAD50-208	ENST00000496204	MAST3	O60307	1309 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	ZEB2	O60315	1214 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	ESRRB	O95718	433 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	SPATA31D3	P0C874	917 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	ADSL	P30566	484 aa	Predicted RBP	3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	PLA2G5	P39877	138 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	AVPR1B	P47901	424 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	PTH2R	P49190	550 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	SESN3	P58005	492 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	CLRN1	P58418	232 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	MRPS21	P82921	87 aa	Known RBP	3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	CDK17	Q00537	523 aa		3.55	□□□□□ -1.84
RAD50-208	ENST00000496204	PPP3CA	Q08209	521 aa		3.55	□□□□□ -1.84

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