RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 CCDC112Q8NEF3 446 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 CACTINQ8WUQ7 758 aaKnown RBP11.97□□□□□ -0.49
PKP4-215ENST00000494945 CCDC127Q96BQ5 260 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 CPB2Q96IY4 423 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 ZNF333Q96JL9 665 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 PANX2Q96RD6 677 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 FNBP1Q96RU3 617 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 SENP6Q9GZR1 1112 aaPredicted RBP11.97□□□□□ -0.49
PKP4-215ENST00000494945 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 MMRN2Q9H8L6 949 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 TMEM8AQ9HCN3 771 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 PLCB1Q9NQ66 1216 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 GCNT4Q9P109 453 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 CAPN11Q9UMQ6 739 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 DAAM1Q9Y4D1 1078 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 SCN1AP35498 2009 aa11.97□□□□□ -0.49
PKP4-215ENST00000494945 ALPK3Q96L96 1907 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 TTC26A0AVF1 554 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 LRRIQ3A6PVS8 624 aaPredicted RBP11.96□□□□□ -0.49
PKP4-215ENST00000494945 IL18RAPO95256 599 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 CAPN2P17655 700 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 PON1P27169 355 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 THPOP40225 353 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 KLK7P49862 253 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 MXI1P50539 228 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 FXR1P51114 621 aaKnown RBP eCLIP11.96□□□□□ -0.49
PKP4-215ENST00000494945 AP3M2P53677 418 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 ZBED6P86452 979 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 PPP3CAQ08209 521 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 ARID5BQ14865 1188 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 TRIM71Q2Q1W2 868 aaKnown RBP11.96□□□□□ -0.49
PKP4-215ENST00000494945 CBWD6Q4V339 395 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 CBWD3Q5JTY5 395 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 FAM26DQ5JW98 314 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 CBWD5Q5RIA9 395 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 ZBTB41Q5SVQ8 909 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 KRT39Q6A163 491 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 ZNF397Q8NF99 534 aaPredicted RBP11.96□□□□□ -0.49
PKP4-215ENST00000494945 CPLX3Q8WVH0 158 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 TMEM40Q8WWA1 233 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 WNT8BQ93098 351 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 CGRRF1Q99675 332 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 CRACR2AQ9BSW2 395 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 LSM14BQ9BX40 385 aaKnown RBP11.96□□□□□ -0.49
PKP4-215ENST00000494945 KCNF1Q9H3M0 494 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 FAM207AQ9NSI2 230 aaPredicted RBP11.96□□□□□ -0.49
PKP4-215ENST00000494945 TRMT13Q9NUP7 481 aaKnown RBP11.96□□□□□ -0.49
PKP4-215ENST00000494945 CEP72Q9P209 647 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 FBXL5Q9UKA1 691 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 LUC7L2Q9Y383 392 aaKnown RBP11.96□□□□□ -0.49
PKP4-215ENST00000494945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.96□□□□□ -0.49
PKP4-215ENST00000494945 SQORQ9Y6N5 450 aa11.96□□□□□ -0.49
PKP4-215ENST00000494945 CEP350Q5VT06 3117 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 TET1Q8NFU7 2136 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 SGPL1O95470 568 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 CHRNA1P02708 482 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 CLTAP09496 248 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 DLATP10515 647 aaKnown RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 FGFR4P22455 802 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 RFX1P22670 979 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 HOXA11P31270 313 aaPredicted RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 KRT9P35527 623 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 TNFSF9P41273 254 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 GRM5P41594 1212 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 GCLMP48507 274 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 CDK7P50613 346 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 ADKP55263 362 aaKnown RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 EPC2Q52LR7 807 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 TRIM65Q6PJ69 517 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 FAM228AQ86W67 206 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 CDR2LQ86X02 465 aaPredicted RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 WDR49Q8IV35 697 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 THNSL1Q8IYQ7 743 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 USP38Q8NB14 1042 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 DHX38Q92620 1227 aaKnown RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 TMEM117Q9H0C3 514 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 NUCKS1Q9H1E3 243 aaKnown RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 RPF1Q9H9Y2 349 aaKnown RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 PDE11AQ9HCR9 933 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 ZKSCAN5Q9Y2L8 839 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 COQ4Q9Y3A0 265 aa11.95□□□□□ -0.5
PKP4-215ENST00000494945 NOC2LQ9Y3T9 749 aaKnown RBP11.95□□□□□ -0.5
PKP4-215ENST00000494945 GPR182O15218 404 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 B4GALT4O60513 344 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 RPS6KA5O75582 802 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 NOL4O94818 638 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 NPTXRO95502 500 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 CTSHP09668 335 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 STAG3L1P0CL83 205 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 TNNI1P19237 187 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 SLC9A1P19634 815 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 FECHP22830 423 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 CCZ1BP86790 482 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 CCZ1P86791 482 aaPredicted RBP11.94□□□□□ -0.5
PKP4-215ENST00000494945 LRMPQ12912 555 aa11.94□□□□□ -0.5
PKP4-215ENST00000494945 ENOX2Q16206 610 aaKnown RBP11.94□□□□□ -0.5
PKP4-215ENST00000494945 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
PKP4-215ENST00000494945 ZACNQ401N2 412 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms