RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CUEDC2Q9H467 287 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ECHDC1Q9NTX5 307 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 THEGQ9P2T0 379 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SERPINA10Q9UK55 444 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 UTP11Q9Y3A2 253 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 FPGT-TNNI3KV9GXZ4 949 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 MYH8P13535 1937 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ZSCAN5BA6NJL1 495 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 FAM196BA6NMK8 535 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 PTCD1O75127 700 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 FTCDO95954 541 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 CLPTM1O96005 669 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 FGFR2P21802 821 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ENPP1P22413 925 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ATICP31939 592 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 MAGEA1P43355 309 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 CUL1Q13616 776 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 PSMD6Q15008 389 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SLC39A14Q15043 492 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 UAP1Q16222 522 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 NDUFA5Q16718 116 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 RRAGBQ5VZM2 374 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 TWF2Q6IBS0 349 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 TYW1BQ6NUM6 668 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 INTS5Q6P9B9 1019 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 CLEC4GQ6UXB4 293 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ASRGL1Q7L266 308 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ILDR1Q86SU0 546 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ZBED8Q8IZ13 594 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ESX1Q8N693 406 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 TNIP2Q8NFZ5 429 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 MYLK2Q9H1R3 596 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 NDE1Q9NXR1 346 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 VPS51Q9UID3 782 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ATP5J2-PTCD1G3V325 749 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 DAPK3O43293 454 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 STRNO43815 780 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 CHRNB1P11230 501 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ADCY8P40145 1251 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 GPC3P51654 580 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 STAT2P52630 851 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 EIF3BP55884 814 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ADAM17P78536 824 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 MRPS9P82933 396 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 EXOSC10Q01780 885 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 AP1B1Q10567 949 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 CLUL1Q15846 466 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 WDR72Q3MJ13 1102 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 GALNTL6Q49A17 601 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 RNF19BQ6ZMZ0 732 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 GIPC2Q8TF65 315 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 NOX5Q96PH1 765 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 GPATCH1Q9BRR8 931 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 PAIP1Q9H074 479 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 KIAA1683Q9H0B3 1180 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 BOLA2Q9H3K6 86 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SH2D4AQ9H788 454 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 PLGRKTQ9HBL7 147 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 TMOD2Q9NZR1 351 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SEPT10Q9P0V9 454 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 PCDHGA3Q9Y5H0 932 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SLC12A7Q9Y666 1083 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 MAD1L1Q9Y6D9 718 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 FER1L6Q2WGJ9 1857 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 FUOMA2VDF0 154 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ANKRD34BA5PLL1 514 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 MAPK13O15264 365 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TBX10O75333 385 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 GMNNO75496 209 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 DDX58O95786 925 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 UBL4AP11441 157 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 HOXD10P28358 340 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 HMOX2P30519 316 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 COPB2P35606 906 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ACADVLP49748 655 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF132P52740 706 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 IFI35P80217 286 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 EHHADHQ08426 723 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 THOC5Q13769 683 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 STK11Q15831 433 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TMEM266Q2M3C6 531 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TDRD12Q587J7 1177 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 KLHDC10Q6PID8 442 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 STOX1Q6ZVD7 989 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 RFPL4BQ6ZWI9 263 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TMTC3Q6ZXV5 915 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF34Q8IZ26 560 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 CCDC82Q8N4S0 544 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 CAPSLQ8WWF8 208 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 C8orf48Q96LL4 319 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TGS1Q96RS0 853 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 PITPNM3Q9BZ71 974 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 LRMDAQ9H2I8 198 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 CCDC177Q9NQR7 707 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 OLFML3Q9NRN5 406 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TMOD3Q9NYL9 352 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 PRKAG3Q9UGI9 489 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TSKSQ9UJT2 592 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 PARP14Q460N5 1801 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms