RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SAPCD2Q86UD0 394 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 LRRC57Q8N9N7 239 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 SLC35B4Q969S0 331 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 SLC35C1Q96A29 364 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 ZBTB21Q9ULJ3 1066 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 FRMD4BQ9Y2L6 1034 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 FAM200BP0CF97 657 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 FGFR4P22455 802 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 PABPC1LQ4VXU2 614 aaKnown RBP10.86□□□□□ -0.67
BRD9-209ENST00000490814 NT5DC3Q86UY8 548 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 CCDC105Q8IYK2 499 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 RTKN2Q8IZC4 609 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 ATP11CQ8NB49 1132 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 FGD4Q96M96 766 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 NDNQ99608 321 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 CORO1BQ9BR76 489 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 THAP2Q9H0W7 228 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 OCEL1Q9H607 264 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 TYW1Q9NV66 732 aaKnown RBP10.86□□□□□ -0.67
BRD9-209ENST00000490814 FGFR1OP2Q9NVK5 253 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 TAS2R14Q9NYV8 317 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 TRIM33Q9UPN9 1127 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 PCDHA2Q9Y5H9 948 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 PAEPP09466 180 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 CCND1P24385 295 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 NT5C2P49902 561 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 CBX3Q13185 183 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 EPHA7Q15375 998 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 SMYD1Q8NB12 490 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 GDAP1Q8TB36 358 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 ARHGEF26Q96DR7 871 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 TMEM59LQ9UK28 342 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 TCP11X1B4DZS4 312 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 ATMINO43313 823 aaPredicted RBP10.86□□□□□ -0.67
BRD9-209ENST00000490814 PDHA1P08559 390 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 PSMC2P35998 433 aaKnown RBP10.86□□□□□ -0.67
BRD9-209ENST00000490814 VPS41P49754 854 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 ODR4Q5SWX8 454 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 PRAMEF18Q5VWM3 479 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 ZFPM1Q8IX07 1006 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 FAM178BQ8IXR5 827 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 SLC17A8Q8NDX2 589 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 FBXO25Q8TCJ0 367 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 C18orf8Q96DM3 657 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 IFT74Q96LB3 600 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 SH2D3AQ9BRG2 576 aa10.86□□□□□ -0.67
BRD9-209ENST00000490814 CLRN2A0PK11 232 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 TMEM221A6NGB7 291 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 FAM86B1E9PN63 330 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 NFKBIEO00221 500 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 PDXKO00764 312 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 ABLIM1O14639 778 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 SPOPO43791 374 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 GSTA1P08263 222 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 FAM86B2P0C5J1 330 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 HOXA10P31260 410 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 SOX5P35711 763 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 LNX1Q8TBB1 728 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 EPS8L3Q8TE67 593 aaKnown RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 ZNF317Q96PQ6 595 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 SUCLA2Q9P2R7 463 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 TUBGCP4Q9UGJ1 667 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 RASAL2Q9UJF2 1139 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 IGSF9BQ9UPX0 1349 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 ASAP2O43150 1006 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 SUN1O94901 812 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 KRT16P08779 473 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 LMNB1P20700 586 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 SHMT1P34896 483 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 TUBP50607 506 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 ITIH4Q14624 930 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 ZYXQ15942 572 aaKnown RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 CERKLQ49MI3 558 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 SEPT14Q6ZU15 432 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 CEP128Q6ZU80 1094 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 PALB2Q86YC2 1186 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 IWS1Q96ST2 819 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 EIF2AK1Q9BQI3 630 aaKnown RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 ERVK-5Q9HDB9 667 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 TMCO1Q9UM00 188 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 GMEB1Q9Y692 573 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 HIP1RO75146 1068 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 TMCC1O94876 653 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 ALOX15P16050 662 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 ATP2A2P16615 1042 aaKnown RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 HOXD13P35453 343 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 PSMC4P43686 418 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 KCNJ1P48048 391 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 PDE6CP51160 858 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 NCALDP61601 193 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 MYL7Q01449 175 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 TSNAXIP1Q2TAA8 658 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 PHLDB2Q86SQ0 1253 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 SYT2Q8N9I0 419 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms