RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PARD3BQ8TEW8 1205 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 RPGRQ92834 1020 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 CHMP4CQ96CF2 233 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 WDR92Q96MX6 357 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 MPHOSPH9Q99550 1183 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 MYL10Q9BUA6 226 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 POFUT1Q9H488 388 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 VTA1Q9NP79 307 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 POLR3BQ9NW08 1133 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 CEP72Q9P209 647 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 FNIP2Q9P278 1114 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 FAM50BQ9Y247 325 aa3.97□□□□□ -1.77
DEPDC1-204ENST00000489862 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 ZNF891A8MT65 544 aaPredicted RBP3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 NBNO60934 754 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 TOX4O94842 621 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 PRPF6O94906 941 aaKnown RBP3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 TRIM27P14373 513 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 SCNN1GP51170 649 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 NEK4P51957 841 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 BCAR1P56945 870 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 TMPRSS15P98073 1019 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 ADCY2Q08462 1091 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 CRHR2Q13324 411 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 MORC3Q14149 939 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 GRM3Q14832 879 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 TUBB8Q3ZCM7 444 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 CYB5RLQ6IPT4 315 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 FAM111BQ6SJ93 734 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 Q6ZRM9 215 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 KANSL1Q7Z3B3 1105 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 BMP8AQ7Z5Y6 402 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 CLEC14AQ86T13 490 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 PHYKPLQ8IUZ5 450 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 CNPY4Q8N129 248 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 C7orf31Q8N865 590 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 SPATA3Q8NHX4 192 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 SARGQ9BW04 601 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 HAPLN2Q9GZV7 340 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 ZNF703Q9H7S9 590 aaPredicted RBP3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 SWAP70Q9UH65 585 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 ZKSCAN5Q9Y2L8 839 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 ATAD2BQ9ULI0 1458 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 SMARCA4P51532 1647 aa3.96□□□□□ -1.78
DEPDC1-204ENST00000489862 PRSS47A8MTI9 375 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 FZD9O00144 591 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 EXOC5O00471 708 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 CYP27B1O15528 508 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PEX11BO96011 259 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 LDHCP07864 332 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 IFIT2P09913 472 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 ADCY1Q08828 1119 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 ZRSR2Q15696 482 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 KRT40Q6A162 431 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 DDX46Q7L014 1031 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 EPM2AIP1Q7L775 607 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 NECAB2Q7Z6G3 386 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PCGF5Q86SE9 256 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 ZBTB46Q86UZ6 589 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 TMPRSS6Q8IU80 811 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PJA1Q8NG27 643 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 CHTF18Q8WVB6 975 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PPM1EQ8WY54 764 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PITHD1Q9GZP4 211 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 MTG2Q9H4K7 406 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 ZMAT4Q9H898 229 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 IL23AQ9NPF7 189 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 INTS7Q9NVH2 962 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 RCAN3Q9UKA8 241 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 IPPQ9Y573 584 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PPP2R3BQ9Y5P8 575 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 NCAPD3P42695 1498 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 A0A0A6YYJ9 748 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 HMGB1P1B2RPK0 211 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 DAPK3O43293 454 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 GAS7O60861 476 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 RFPL1O75677 317 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 TCEA3O75764 348 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 GCP02774 474 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 VSIG10L2P0DP72 767 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 IARSP41252 1262 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 DSG1Q02413 1049 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 ELAVL1Q15717 326 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 GFOD2Q3B7J2 385 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 GAGE13Q4V321 117 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 SYDE2Q5VT97 1194 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 EFCAB2Q5VUJ9 269 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 TIGD7Q6NT04 549 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 XRRA1Q6P2D8 792 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PASD1Q8IV76 773 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 ANKRD35Q8N283 1001 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 MIEF2Q96C03 454 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 STRBPQ96SI9 672 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 NAP1L4Q99733 375 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 TCF25Q9BQ70 676 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 ORAI3Q9BRQ5 295 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 SOX7Q9BT81 388 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 PAGR1Q9BTK6 254 aa3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 THG1LQ9NWX6 298 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-204ENST00000489862 SAGE1Q9NXZ1 904 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms