RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 LGALS16A8MUM7 142 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 CBFA2T2O43439 604 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 NBNO60934 754 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 NPTXRO95502 500 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 CXCL10P02778 98 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 CLTAP09496 248 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 HARSP12081 509 aaKnown RBP17.42■□□□□ 0.38
CLDN11-208ENST00000488989 KRT13P13646 458 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 PRKCSHP14314 528 aaPredicted RBP17.42■□□□□ 0.38
CLDN11-208ENST00000488989 TNFSF9P41273 254 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 ZNF75DP51815 510 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 CLDN10P78369 228 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 NFX1Q12986 1120 aaKnown RBP17.42■□□□□ 0.38
CLDN11-208ENST00000488989 PSMD6Q15008 389 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 FILIP1LQ4L180 1135 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 VWA3BQ502W6 1294 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 PARD3BQ8TEW8 1205 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 MRFAP1L1Q96HT8 127 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 EIF2AQ9BY44 585 aaKnown RBP17.42■□□□□ 0.38
CLDN11-208ENST00000488989 TRIM5Q9C035 493 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 XPO4Q9C0E2 1151 aaKnown RBP17.42■□□□□ 0.38
CLDN11-208ENST00000488989 VPS16Q9H269 839 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 INTS13Q9NVM9 706 aa17.42■□□□□ 0.38
CLDN11-208ENST00000488989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLDN11-208ENST00000488989 TPM2P07951 284 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 STAG3L1P0CL83 205 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 VAMP7P51809 220 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 PLCB2Q00722 1185 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 KCNH2Q12809 1159 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 SURF1Q15526 300 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 PLEKHG4Q58EX7 1191 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 C1orf220Q5T0J3 134 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 COL13A1Q5TAT6 717 aaPredicted RBP17.41■□□□□ 0.38
CLDN11-208ENST00000488989 CREBRFQ8IUR6 639 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 THNSL1Q8IYQ7 743 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 IFIH1Q9BYX4 1025 aaKnown RBP17.41■□□□□ 0.38
CLDN11-208ENST00000488989 NDST4Q9H3R1 872 aa17.41■□□□□ 0.38
CLDN11-208ENST00000488989 RBAKQ9NYW8 714 aaPredicted RBP17.41■□□□□ 0.38
CLDN11-208ENST00000488989 PMM2O15305 246 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 MGEA5O60502 916 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 ZNF623O75123 536 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 ADCY5O95622 1261 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 ZSCAN20P17040 1043 aaPredicted RBP17.4■□□□□ 0.38
CLDN11-208ENST00000488989 RFC2P35250 354 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 PBX1P40424 430 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 ENOX2Q16206 610 aaKnown RBP17.4■□□□□ 0.38
CLDN11-208ENST00000488989 SEZ6Q53EL9 994 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 TWF2Q6IBS0 349 aaKnown RBP17.4■□□□□ 0.38
CLDN11-208ENST00000488989 USP37Q86T82 979 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 TMEM192Q8IY95 271 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 APBB2Q92870 758 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 ABHD8Q96I13 439 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 FTHL17Q9BXU8 183 aa17.4■□□□□ 0.38
CLDN11-208ENST00000488989 RPF1Q9H9Y2 349 aaKnown RBP17.4■□□□□ 0.38
CLDN11-208ENST00000488989 TTC3P53804 2025 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 TRIM43BA6NCK2 446 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 LRRIQ3A6PVS8 624 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 MEFVO15553 781 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 TEX33O43247 280 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 IL18RAPO95256 599 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 TIMP1P01033 207 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 TPM3P06753 285 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 CDC25BP30305 580 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 GTF2H1P32780 548 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 CYP2C18P33260 490 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 RAB27AP51159 221 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 WNT7BP56706 349 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 DLG4P78352 724 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 MRPL10Q7Z7H8 261 aaKnown RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 SMG8Q8ND04 991 aaKnown RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 TRIM43Q96BQ3 446 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 ACAP3Q96P50 834 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 PPP1R12CQ9BZL4 782 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 TRIM6Q9C030 488 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-208ENST00000488989 ASB7Q9H672 318 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 RGS18Q9NS28 235 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 FAM105AQ9NUU6 356 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 IPPQ9Y573 584 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 LTBP2Q14767 1821 aa17.39■□□□□ 0.37
CLDN11-208ENST00000488989 A0A0U1RQF3 1178 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 TTC26A0AVF1 554 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 GTPBP10A4D1E9 387 aaKnown RBP17.38■□□□□ 0.37
CLDN11-208ENST00000488989 P4HA2O15460 535 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 STX10O60499 249 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 TRIM49P0CI25 452 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 TRIM49CP0CI26 452 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 SKIP12755 728 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 FMO5P49326 533 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 CCL23P55773 120 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 SLC10A6Q3KNW5 377 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 XKR4Q5GH76 650 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 DCAF17Q5H9S7 520 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-208ENST00000488989 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-208ENST00000488989 RTN4RL1Q86UN2 441 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-208ENST00000488989 CD302Q8IX05 232 aa17.38■□□□□ 0.37
CLDN11-208ENST00000488989 DBF4BQ8NFT6 615 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms