RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SYCP3Q8IZU3 236 aa20.89■□□□□ 0.93
HMG20B-213ENST00000488973 EME2A4GXA9 379 aaPredicted RBP20.88■□□□□ 0.93
HMG20B-213ENST00000488973 GJB6O95452 261 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 ANP32DO95626 131 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 KCNJ1P48048 391 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 RRP1BQ14684 758 aaKnown RBP20.88■□□□□ 0.93
HMG20B-213ENST00000488973 VSTM1Q6UX27 236 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 ANKRD23Q86SG2 305 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 RDH13Q8NBN7 331 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 NSMCE1Q8WV22 266 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 WDR18Q9BV38 432 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 AAASQ9NRG9 546 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 ARL2BPQ9Y2Y0 163 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 SCNN1DP51172 638 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 ALDH5A1P51649 535 aaPredicted RBP20.88■□□□□ 0.93
HMG20B-213ENST00000488973 PRELPP51888 382 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 MYO1EQ12965 1108 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 LRRC14Q15048 493 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 EPC2Q52LR7 807 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 RNF207Q6ZRF8 634 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 NLGN1Q8N2Q7 840 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 AGAP11Q8TF27 550 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 TMEM174Q8WUU8 243 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 CKAP2Q8WWK9 683 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 SLC5A5Q92911 643 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 TEKT1Q969V4 418 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 PCDHB18PQ96TA0 734 aa20.88■□□□□ 0.93
HMG20B-213ENST00000488973 DDX23Q9BUQ8 820 aaKnown RBP20.88■□□□□ 0.93
HMG20B-213ENST00000488973 RIMBP2O15034 1052 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 SPOPO43791 374 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 SHROOM1Q2M3G4 852 aaPredicted RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 NUGGCQ68CJ6 796 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 ZNF746Q6NUN9 644 aaPredicted RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 ZFPM1Q8IX07 1006 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 ZNF564Q8TBZ8 553 aaPredicted RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 IFT74Q96LB3 600 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 BATF3Q9NR55 127 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 NOP53Q9NZM5 478 aaKnown RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 TP73O15350 636 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 CHMP2AO43633 222 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 APBA3O96018 575 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 CYP1A2P05177 515 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 CHRNB2P17787 502 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 ITIH2P19823 946 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 CCND1P24385 295 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 DLG4P78352 724 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 MKRN3Q13064 507 aaKnown RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 RHBDF2Q6PJF5 856 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 SPATA21Q7Z572 469 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 DRAXINQ8NBI3 349 aaPredicted RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 MGARPQ8TDB4 240 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 EPS8L1Q8TE68 723 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 TMX4Q9H1E5 349 aaPredicted RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 ARHGEF3Q9NR81 526 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 NOCTQ9UK39 431 aaKnown RBP20.87■□□□□ 0.93
HMG20B-213ENST00000488973 L3MBTL1Q9Y468 752 aa20.87■□□□□ 0.93
HMG20B-213ENST00000488973 IGF2BP3O00425 579 aaKnown RBP eCLIP20.86■□□□□ 0.93
HMG20B-213ENST00000488973 VAMP7P51809 220 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 IKQ13123 557 aaPredicted RBP20.86■□□□□ 0.93
HMG20B-213ENST00000488973 CDCA2Q69YH5 1023 aaPredicted RBP20.86■□□□□ 0.93
HMG20B-213ENST00000488973 KLHL29Q96CT2 875 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 THOC1Q96FV9 657 aaKnown RBP20.86■□□□□ 0.93
HMG20B-213ENST00000488973 NUP85Q9BW27 656 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 RXFP1Q9HBX9 757 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 TCEA3O75764 348 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 ECM2O94769 699 aaPredicted RBP20.86■□□□□ 0.93
HMG20B-213ENST00000488973 ACSL3O95573 720 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 NDUFB10O96000 172 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 PPP3CAQ08209 521 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 TMEM179Q6ZVK1 233 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 OTUD6AQ7L8S5 288 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 FAM71AQ8IYT1 594 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 PLVAPQ9BX97 442 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 UVRAGQ9P2Y5 699 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 PRKAG3Q9UGI9 489 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 USP20Q9Y2K6 914 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 EP400Q96L91 3159 aa20.86■□□□□ 0.93
HMG20B-213ENST00000488973 FSCN2O14926 492 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 AP1G2O75843 785 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 SGPL1O95470 568 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 KRT17Q04695 432 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 NOP9Q86U38 636 aaKnown RBP20.85■□□□□ 0.93
HMG20B-213ENST00000488973 KIF9Q9HAQ2 790 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 PI4KBQ9UBF8 816 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 CHORDC1Q9UHD1 332 aaPredicted RBP20.85■□□□□ 0.93
HMG20B-213ENST00000488973 GGT7Q9UJ14 662 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 GTF3C4Q9UKN8 822 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 FAM196BA6NMK8 535 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 TTC4O95801 387 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 CREB1P16220 341 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 RXRBP28702 533 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 NAA25Q14CX7 972 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 TATDN1Q6P1N9 297 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 SLC30A10Q6XR72 485 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 SYDE1Q6ZW31 735 aaPredicted RBP20.85■□□□□ 0.93
HMG20B-213ENST00000488973 SP8Q8IXZ3 490 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 TMEM206Q9H813 350 aa20.85■□□□□ 0.93
HMG20B-213ENST00000488973 PMM2O15305 246 aa20.84■□□□□ 0.93
HMG20B-213ENST00000488973 ATMINO43313 823 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms