RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 FAM153BP0C7A2 387 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 CCT5P48643 541 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 FAM153CQ494X1 144 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 DPY19L2P1Q6NXN4 242 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 MAEAQ7L5Y9 396 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 EPM2AIP1Q7L775 607 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-215ENST00000488897 ZNF571Q7Z3V5 609 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-215ENST00000488897 C1orf131Q8NDD1 294 aaKnown RBP19.78■□□□□ 0.76
COL16A1-215ENST00000488897 CASKIN2Q8WXE0 1202 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 SEPT1Q8WYJ6 367 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 FAM153AQ9UHL3 310 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 PCDHA10Q9Y5I2 948 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 ATP8B3O60423 1300 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 LOC102724159A0A0B4J2E5 919 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 ESYT3A0FGR9 886 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 KIF4AO95239 1232 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 ASGR1P07306 291 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 SLC9A1P19634 815 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 RPL13P26373 211 aaKnown RBP19.78■□□□□ 0.76
COL16A1-215ENST00000488897 PRKCIP41743 596 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 SOX10P56693 466 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 IGBP1P78318 339 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 LAMC2Q13753 1193 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 PWP2Q15269 919 aaKnown RBP19.78■□□□□ 0.76
COL16A1-215ENST00000488897 HSD17B14Q9BPX1 270 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 FBXL5Q9UKA1 691 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 NFASCO94856 1347 aa19.78■□□□□ 0.76
COL16A1-215ENST00000488897 A0A087WUV0 522 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-215ENST00000488897 WDR64B1ANS9 1081 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 KCNK3O14649 394 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 LGALS2P05162 132 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 ACTN1P12814 892 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 PON1P27169 355 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 CASP5P51878 434 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 SKIDA1Q1XH10 827 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 PAK6Q9NQU5 681 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-215ENST00000488897 ZSCAN5CA6NGD5 496 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-215ENST00000488897 SUPT20HL2P0C7V6 817 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 MYBP10242 640 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 ZNF200P98182 395 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-215ENST00000488897 KRT76Q01546 638 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 HIC1Q14526 733 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 EMC10Q5UCC4 262 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 KCNV1Q6PIU1 500 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 VPS36Q86VN1 386 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 SFR1Q86XK3 245 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 PPTC7Q8NI37 304 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 ACTRT1Q8TDG2 376 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 LMBR1Q8WVP7 490 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 KAT2BQ92831 832 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 VTI1AQ96AJ9 217 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 C16orf70Q9BSU1 422 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 TYW1Q9NV66 732 aaKnown RBP19.77■□□□□ 0.76
COL16A1-215ENST00000488897 NAGPAQ9UK23 515 aa19.77■□□□□ 0.76
COL16A1-215ENST00000488897 SLC16A3O15427 465 aaKnown RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 RAD51CO43502 376 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 KRT14P02533 472 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 NOP2P46087 812 aaKnown RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 RNASE9P60153 205 aaKnown RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 BMT2Q1RMZ1 405 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 ALKBH5Q6P6C2 394 aaKnown RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 KDM7AQ6ZMT4 941 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 U2AF1L4Q8WU68 220 aaKnown RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 REEP2Q9BRK0 252 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 ZNF302Q9NR11 478 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 A6NJR5 290 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 ZNF233A6NK53 670 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 STAT5BP51692 787 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 GUCY2FP51841 1108 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 TTC31Q49AM3 519 aaPredicted RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 ZNF746Q6NUN9 644 aaPredicted RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 CALR3Q96L12 384 aaKnown RBP19.76■□□□□ 0.75
COL16A1-215ENST00000488897 ISCUQ9H1K1 167 aa19.76■□□□□ 0.75
COL16A1-215ENST00000488897 EN2P19622 333 aaPredicted RBP19.75■□□□□ 0.75
COL16A1-215ENST00000488897 ATN1P54259 1190 aaPredicted RBP19.75■□□□□ 0.75
COL16A1-215ENST00000488897 CUL1Q13616 776 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 EPHA7Q15375 998 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 KLHL7Q8IXQ5 586 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 KCTD17Q8N5Z5 321 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 PIK3R5Q8WYR1 880 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 ZNF668Q96K58 619 aaPredicted RBP19.75■□□□□ 0.75
COL16A1-215ENST00000488897 ATG7O95352 703 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 HOXD13P35453 343 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 HSPA9P38646 679 aaKnown RBP19.75■□□□□ 0.75
COL16A1-215ENST00000488897 GJA9P57773 515 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 MIS18BP1Q6P0N0 1132 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 ANO5Q75V66 913 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 LRRC57Q8N9N7 239 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 INTUQ9ULD6 942 aa19.75■□□□□ 0.75
COL16A1-215ENST00000488897 ANKRD65E5RJM6 399 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 AKAP3O75969 853 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 NR3C1P04150 777 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 PSAPP07602 524 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 DCAF17Q5H9S7 520 aaPredicted RBP19.74■□□□□ 0.75
COL16A1-215ENST00000488897 KCTD16Q68DU8 428 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 WDR81Q562E7 1941 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 A0A0A6YYK5 440 aaPredicted RBP19.74■□□□□ 0.75
COL16A1-215ENST00000488897 GTPBP10A4D1E9 387 aaKnown RBP19.74■□□□□ 0.75
COL16A1-215ENST00000488897 CEP104O60308 925 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 CPP00450 1065 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms