RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MED15Q96RN5 788 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 RBAKQ9NYW8 714 aaPredicted RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 PARP2Q9UGN5 583 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 GOLGA6L19H0YKK7 550 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 RECQL4O94761 1208 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 CAVIN2O95810 425 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 LDHAP00338 332 aaKnown RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 ADRB2P07550 413 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 CXCL8P10145 99 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 SKIP12755 728 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 ITGA4P13612 1032 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 KCNJ6P48051 423 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 EPHB4P54760 987 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 SNRNP35Q16560 246 aaKnown RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 ZNF365Q70YC5 407 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 SLC24A5Q71RS6 500 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 RTN4RL1Q86UN2 441 aaPredicted RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 ECHDC2Q86YB7 292 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 SMG8Q8ND04 991 aaKnown RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 CEP63Q96MT8 703 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 RPF1Q9H9Y2 349 aaKnown RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 DMAC2Q9NW81 257 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
TRAIP-209ENST00000488860 TNRC18O15417 2968 aaPredicted RBP13.41□□□□□ -0.26
TRAIP-209ENST00000488860 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 ABHD14A-ACY1A0A1B0GW23 586 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 C9IYK1 514 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 ENPP3O14638 875 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 IKBKBO14920 756 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 SLC16A3O15427 465 aaKnown RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 FAM189A1O60320 539 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 AKAP3O75969 853 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 BAIAP3O94812 1187 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 FGBP02675 491 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 AMHP03971 560 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 CLTAP09496 248 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 ATF7P17544 494 aaPredicted RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 TPM4P67936 248 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 HSP90AA2PQ14568 343 aaPredicted RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 IQCB1Q15051 598 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 KYAT1Q16773 422 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 DCAF17Q5H9S7 520 aaPredicted RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 FOXR2Q6PJQ5 311 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 BRSK2Q8IWQ3 736 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 PGBD4Q96DM1 585 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 ACAP3Q96P50 834 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 KIAA1586Q9HCI6 787 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 SAMSN1Q9NSI8 373 aaKnown RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 KLK14Q9P0G3 267 aa13.4□□□□□ -0.26
TRAIP-209ENST00000488860 CPSF3Q9UKF6 684 aaKnown RBP13.4□□□□□ -0.26
TRAIP-209ENST00000488860 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 EFCAB14O75071 495 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 UPP2O95045 317 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 KRT13P13646 458 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 MLH1P40692 756 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 MTIF2P46199 727 aaKnown RBP13.39□□□□□ -0.27
TRAIP-209ENST00000488860 WDR5P61964 334 aaKnown RBP13.39□□□□□ -0.27
TRAIP-209ENST00000488860 DEFB103AP81534 67 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 NCAPHQ15003 741 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 ENOX2Q16206 610 aaKnown RBP13.39□□□□□ -0.27
TRAIP-209ENST00000488860 TMEM240Q5SV17 173 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 C16orf59Q7L2K0 433 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 FILIP1Q7Z7B0 1213 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 GAS2L3Q86XJ1 694 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 CCDC127Q96BQ5 260 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 SNX27Q96L92 541 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 RPS6KC1Q96S38 1066 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 TRAIPQ9BWF2 469 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 RNF39Q9H2S5 420 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 MMRN2Q9H8L6 949 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 RSAD1Q9HA92 442 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
TRAIP-209ENST00000488860 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 PCDHB7Q9Y5E2 793 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 NLRC5Q86WI3 1866 aa13.39□□□□□ -0.27
TRAIP-209ENST00000488860 KCNJ18B7U540 433 aa13.38□□□□□ -0.27
TRAIP-209ENST00000488860 H0YGN5 161 aa13.38□□□□□ -0.27
TRAIP-209ENST00000488860 GNA14O95837 355 aa13.38□□□□□ -0.27
TRAIP-209ENST00000488860 DLATP10515 647 aaKnown RBP13.38□□□□□ -0.27
TRAIP-209ENST00000488860 FGFR1P11362 822 aa13.38□□□□□ -0.27
TRAIP-209ENST00000488860 SPAG1Q07617 926 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms