RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 SLC35C1Q96A29 364 aa16.46■□□□□ 0.23
CTNS-206ENST00000488623 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
CTNS-206ENST00000488623 ERVK-5Q9HDB9 667 aa16.46■□□□□ 0.23
CTNS-206ENST00000488623 CPSF3Q9UKF6 684 aaKnown RBP16.46■□□□□ 0.23
CTNS-206ENST00000488623 SQORQ9Y6N5 450 aa16.46■□□□□ 0.23
CTNS-206ENST00000488623 DCDC2CA8MYV0 355 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 PES1O00541 588 aaKnown RBP16.45■□□□□ 0.22
CTNS-206ENST00000488623 GPR182O15218 404 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 NPTXRO95502 500 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 CD52P31358 61 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 WNT7BP56706 349 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 NFX1Q12986 1120 aaKnown RBP16.45■□□□□ 0.22
CTNS-206ENST00000488623 MBTPS1Q14703 1052 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 LRRC26Q2I0M4 334 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 DCAF17Q5H9S7 520 aaPredicted RBP16.45■□□□□ 0.22
CTNS-206ENST00000488623 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 SLC27A1Q6PCB7 646 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 NECAB2Q7Z6G3 386 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.45■□□□□ 0.22
CTNS-206ENST00000488623 TMEM192Q8IY95 271 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 CCDC155Q8N6L0 562 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 TMC2Q8TDI7 906 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 PARD3BQ8TEW8 1205 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 EIF2AQ9BY44 585 aaKnown RBP16.45■□□□□ 0.22
CTNS-206ENST00000488623 PADI3Q9ULW8 664 aa16.45■□□□□ 0.22
CTNS-206ENST00000488623 PIN4Q9Y237 131 aaKnown RBP16.45■□□□□ 0.22
CTNS-206ENST00000488623 DNAH12Q6ZR08 3092 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 AFPP02771 609 aaKnown RBP16.44■□□□□ 0.22
CTNS-206ENST00000488623 TPM3P06753 285 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 STAG3L1P0CL83 205 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 SELPP16109 830 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 OSTNP61366 133 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 ENPEPQ07075 957 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 HSP90AA2PQ14568 343 aaPredicted RBP16.44■□□□□ 0.22
CTNS-206ENST00000488623 GPNMBQ14956 572 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 PSMD6Q15008 389 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 DCAF4L1Q3SXM0 396 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 HABP4Q5JVS0 413 aaKnown RBP16.44■□□□□ 0.22
CTNS-206ENST00000488623 VSTM4Q8IW00 320 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 BRSK2Q8IWQ3 736 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 CCDC127Q96BQ5 260 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 POP1Q99575 1024 aaKnown RBP16.44■□□□□ 0.22
CTNS-206ENST00000488623 ADPGKQ9BRR6 497 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 PDE11AQ9HCR9 933 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 RBAKQ9NYW8 714 aaPredicted RBP16.44■□□□□ 0.22
CTNS-206ENST00000488623 ATP11BQ9Y2G3 1177 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 UMODL1Q5DID0 1318 aa16.44■□□□□ 0.22
CTNS-206ENST00000488623 LRRIQ3A6PVS8 624 aaPredicted RBP16.43■□□□□ 0.22
CTNS-206ENST00000488623 MEFVO15553 781 aaPredicted RBP16.43■□□□□ 0.22
CTNS-206ENST00000488623 CLTAP09496 248 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 GRM5P41594 1212 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 PAK2Q13177 524 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 DSC3Q14574 896 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 ENOX2Q16206 610 aaKnown RBP16.43■□□□□ 0.22
CTNS-206ENST00000488623 KYAT1Q16773 422 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 FKBP15Q5T1M5 1219 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 LRRC8DQ7L1W4 858 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 TMC6Q7Z403 805 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 USP38Q8NB14 1042 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 ZNF516Q92618 1163 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 ERGIC2Q96RQ1 377 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 TMX1Q9H3N1 280 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 CHST12Q9NRB3 414 aa16.43■□□□□ 0.22
CTNS-206ENST00000488623 COLQQ9Y215 455 aaPredicted RBP16.43■□□□□ 0.22
CTNS-206ENST00000488623 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
CTNS-206ENST00000488623 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 MGEA5O60502 916 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 DEKP35659 375 aaKnown RBP16.42■□□□□ 0.22
CTNS-206ENST00000488623 FMO5P49326 533 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 KLK7P49862 253 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 CLDN10P78369 228 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 POU5F1Q01860 360 aaKnown RBP16.42■□□□□ 0.22
CTNS-206ENST00000488623 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 KCNMA1Q12791 1236 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 APBB1IPQ7Z5R6 666 aaPredicted RBP16.42■□□□□ 0.22
CTNS-206ENST00000488623 DRC7Q8IY82 874 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 SPC24Q8NBT2 197 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 RPF1Q9H9Y2 349 aaKnown RBP16.42■□□□□ 0.22
CTNS-206ENST00000488623 TOPORSQ9NS56 1045 aaPredicted RBP16.42■□□□□ 0.22
CTNS-206ENST00000488623 NR2E3Q9Y5X4 410 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 ANK1P16157 1881 aa16.42■□□□□ 0.22
CTNS-206ENST00000488623 A0A1W2PQC6 194 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 LACTBL1A8MY62 500 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 EVI5O60447 810 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 NBNO60934 754 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 CXCL8P10145 99 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 DLATP10515 647 aaKnown RBP16.41■□□□□ 0.22
CTNS-206ENST00000488623 GCLMP48507 274 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 SYCP1Q15431 976 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 SLC10A6Q3KNW5 377 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
CTNS-206ENST00000488623 SMG8Q8ND04 991 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms