RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 OGTO15294 1046 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 RECQL4O94761 1208 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 MLH1P40692 756 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 STIM1Q13586 685 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 ZNF658Q5TYW1 1059 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-219ENST00000488186 ISM2Q6H9L7 571 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 LRRC43Q8N309 656 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 KIAA0895Q8NCT3 520 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 GOLGA5Q8TBA6 731 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 SAMD11Q96NU1 681 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 TGS1Q96RS0 853 aaKnown RBP17.17■□□□□ 0.34
C9orf3-219ENST00000488186 GAD1Q99259 594 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 CLSTN2Q9H4D0 955 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 RPF1Q9H9Y2 349 aaKnown RBP17.17■□□□□ 0.34
C9orf3-219ENST00000488186 RNF19AQ9NV58 838 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 TYW1Q9NV66 732 aaKnown RBP17.17■□□□□ 0.34
C9orf3-219ENST00000488186 MAPK8IP1Q9UQF2 711 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 RWDD3Q9Y3V2 267 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 TRANK1O15050 2925 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 LINC01553A4QN01 128 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 SLC34A2O95436 690 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 LDHAP00338 332 aaKnown RBP17.16■□□□□ 0.34
C9orf3-219ENST00000488186 POMCP01189 267 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 CLTAP09496 248 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 GARTP22102 1010 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 SNRPFP62306 86 aaKnown RBP17.16■□□□□ 0.34
C9orf3-219ENST00000488186 TAP1Q03518 808 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 HSP90AA2PQ14568 343 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-219ENST00000488186 SEZ6Q53EL9 994 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 SLC39A4Q6P5W5 647 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 CEP120Q8N960 986 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 GPT2Q8TD30 523 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 IKZF4Q9H2S9 585 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 PCIF1Q9H4Z3 704 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 CGNQ9P2M7 1197 aaKnown RBP17.16■□□□□ 0.34
C9orf3-219ENST00000488186 MTUS1Q9ULD2 1270 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 RALGAPA2Q2PPJ7 1873 aa17.16■□□□□ 0.34
C9orf3-219ENST00000488186 TISP43B9A030 160 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 BIN1O00499 593 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 ABLIM1O14639 778 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 KIAA0391O15091 583 aaKnown RBP17.15■□□□□ 0.34
C9orf3-219ENST00000488186 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-219ENST00000488186 SCNN1GP51170 649 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 BMT2Q1RMZ1 405 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 SPATA20Q8TB22 786 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 ZFP42Q96MM3 310 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 CERS4Q9HA82 394 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 TBC1D13Q9NVG8 400 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 KIAA1468Q9P260 1216 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 MAN1B1Q9UKM7 699 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 PCDHB12Q9Y5F1 795 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 MRPL42Q9Y6G3 142 aaKnown RBP17.15■□□□□ 0.34
C9orf3-219ENST00000488186 STYXL1Q9Y6J8 313 aa17.15■□□□□ 0.34
C9orf3-219ENST00000488186 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-219ENST00000488186 CLIC2O15247 247 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 THP07101 528 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 LAG3P18627 525 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 POU3F3P20264 500 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-219ENST00000488186 ADSSP30520 456 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 CTNNB1P35222 781 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 HOXD13P35453 343 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 ALDH7A1P49419 539 aaKnown RBP17.14■□□□□ 0.33
C9orf3-219ENST00000488186 ACOT2P49753 483 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 ERVK-21P61565 698 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 TMEM192Q8IY95 271 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 SMYD4Q8IYR2 804 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-219ENST00000488186 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
C9orf3-219ENST00000488186 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
C9orf3-219ENST00000488186 SAAL1Q96ER3 474 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 FAM213AQ9BRX8 229 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 HAPLN2Q9GZV7 340 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 AGPAT3Q9NRZ7 376 aa17.14■□□□□ 0.33
C9orf3-219ENST00000488186 CARNS1A5YM72 827 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 GOLGA8IPA6NC78 632 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 GOLGA8JA6NMD2 632 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 PDXKO00764 312 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 ZC3H11AO75152 810 aaKnown RBP eCLIP17.13■□□□□ 0.33
C9orf3-219ENST00000488186 ALDH2P05091 517 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 BMPR1AP36894 532 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 PPP1R2P41236 205 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 TNFSF9P41273 254 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 CYP2J2P51589 502 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 PPP2R3AQ06190 1150 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 GRIK3Q13003 919 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 LRRC55Q6ZSA7 311 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 Q7L0L9 218 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 GUCD1Q96NT3 240 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 TSG101Q99816 390 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 CBWD1Q9BRT8 395 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 C17orf80Q9BSJ5 609 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 PLEKHA5Q9HAU0 1116 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 KIAA1586Q9HCI6 787 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 MIOSQ9NXC5 875 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 STXBP5LQ9Y2K9 1186 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
C9orf3-219ENST00000488186 NLRC5Q86WI3 1866 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 TGFB1I1O43294 461 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 EXTL3O43909 919 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms