RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, human

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-C-208	ENST00000487245	PROCA1	Q8NCQ7	364 aa	Predicted RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	UBLCP1	Q8WVY7	318 aa	Predicted RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	SHC3	Q92529	594 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	ALG3	Q92685	438 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	FAM81B	Q96LP2	452 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	WDR81	Q562E7	1941 aa		28.07	■■■□□ 2.08
HLA-C-208	ENST00000487245	MAP2K1	Q02750	393 aa	Predicted RBP	28.07	■■■□□ 2.08
HLA-C-208	ENST00000487245	ATP6V0A4	Q9HBG4	840 aa		28.07	■■■□□ 2.08
HLA-C-208	ENST00000487245	ZDHHC18	Q9NUE0	388 aa		28.07	■■■□□ 2.08
HLA-C-208	ENST00000487245	SLC12A6	Q9UHW9	1150 aa		28.07	■■■□□ 2.08
HLA-C-208	ENST00000487245	RGS20	O76081	388 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	GBP1	P32455	592 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	DHX9	Q08211	1270 aa	Known RBP	28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	ABHD15	Q6UXT9	468 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	BSND	Q8WZ55	320 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	POMGNT1	Q8WZA1	660 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	KLRG1	Q96E93	195 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	SAAL1	Q96ER3	474 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	NT5C1B	Q96P26	610 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	FMO2	Q99518	471 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	ZSWIM1	Q9BR11	485 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	CTTNBP2NL	Q9P2B4	639 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	NOCT	Q9UK39	431 aa	Known RBP	28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	PHF2	O75151	1096 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	ERLIN2	O94905	339 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	USP8	P40818	1118 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	ACTR2	P61160	394 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	CYP24A1	Q07973	514 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	XKR3	Q5GH77	459 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	NAA35	Q5VZE5	725 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	MICALCL	Q6ZW33	695 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	NLRP14	Q86W24	1093 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	PPM1K	Q8N3J5	372 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	FBXL13	Q8NEE6	735 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	OR2W6P	Q8NHA6	318 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	TRIM51	Q9BSJ1	452 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	KIAA1586	Q9HCI6	787 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	A1CF	Q9NQ94	594 aa	Known RBP	28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	CYP26B1	Q9NR63	512 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	RASAL2	Q9UJF2	1139 aa		28.06	■■■□□ 2.08
HLA-C-208	ENST00000487245	KIAA1217	Q5T5P2	1943 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	CHRNB2	P17787	502 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	CHRNA3	P32297	505 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	TTC31	Q49AM3	519 aa	Predicted RBP	28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	ENOSF1	Q7L5Y1	443 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	YTHDF3	Q7Z739	585 aa	Known RBP	28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	GPD1L	Q8N335	351 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	EPS8L1	Q8TE68	723 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	ZNF473	Q8WTR7	871 aa	Known RBP	28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	KREMEN1	Q96MU8	473 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	WNT8A	Q9H1J5	351 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	DPH5	Q9H2P9	285 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	ERVK-5	Q9HDB9	667 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	ARID2	Q68CP9	1835 aa		28.05	■■■□□ 2.08
HLA-C-208	ENST00000487245	SGPL1	O95470	568 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	FAM107A	O95990	144 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	PAEP	P09466	180 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	CTNNA2	P26232	953 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	PRPF4B	Q13523	1007 aa	Known RBP	28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	MYCBPAP	Q8TBZ2	947 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	SEMA4D	Q92854	862 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	KCNN1	Q92952	543 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	CCDC127	Q96BQ5	260 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	KIFC3	Q9BVG8	833 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	RAB20	Q9NX57	234 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	SEPT9	Q9UHD8	586 aa	Predicted RBP	28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	PCYOX1	Q9UHG3	505 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	ANKRD65	E5RJM6	399 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	ZC3H11A	O75152	810 aa	Known RBP eCLIP	28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	SUPT20HL2	P0C7V6	817 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	PTGIR	P43119	386 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	PRKCE	Q02156	737 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	SKIDA1	Q1XH10	827 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	SUPT20HL1	Q3ZLR7	823 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	SLC39A4	Q6P5W5	647 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	JAML	Q86YT9	394 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	CHST13	Q8NET6	341 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	CCT8L2	Q96SF2	557 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	RABEP2	Q9H5N1	569 aa		28.04	■■■□□ 2.08
HLA-C-208	ENST00000487245	KIAA0391	O15091	583 aa	Known RBP	28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	NUDT17	P0C025	328 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	ICAM3	P32942	547 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	PEX5	P50542	639 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	PPP2R2A	P63151	447 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	SH3D19	Q5HYK7	790 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	NOP9	Q86U38	636 aa	Known RBP	28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	DNER	Q8NFT8	737 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	HELQ	Q8TDG4	1101 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	KAT5	Q92993	513 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	CD101	Q93033	1021 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	PCDHB18P	Q96TA0	734 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	AFG3L2	Q9Y4W6	797 aa		28.03	■■■□□ 2.08
HLA-C-208	ENST00000487245	TULP1	O00294	542 aa	Predicted RBP	28.02	■■■□□ 2.08
HLA-C-208	ENST00000487245	CYP1A2	P05177	515 aa		28.02	■■■□□ 2.08
HLA-C-208	ENST00000487245	CCDC60	Q8IWA6	550 aa	Predicted RBP	28.02	■■■□□ 2.08
HLA-C-208	ENST00000487245	RUNDC3B	Q96NL0	473 aa		28.02	■■■□□ 2.08
HLA-C-208	ENST00000487245	XPNPEP1	Q9NQW7	623 aa		28.02	■■■□□ 2.08
HLA-C-208	ENST00000487245	ARHGAP28	Q9P2N2	729 aa		28.02	■■■□□ 2.08
HLA-C-208	ENST00000487245	CYP26A1	O43174	497 aa		28.02	■■■□□ 2.08

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