RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TNNT1P13805 278 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ALOX12P18054 663 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 HDCP19113 662 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 SCNN1BP51168 640 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 CLCN2P51788 898 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 YARSP54577 528 aaKnown RBP6.04□□□□□ -1.44
SF1-217ENST00000486960 EPHB4P54760 987 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 RRP1P56182 461 aaKnown RBP6.04□□□□□ -1.44
SF1-217ENST00000486960 ARL4CP56559 192 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 AP2B1P63010 937 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 KCNC4Q03721 635 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 MBTPS1Q14703 1052 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 CWF19L2Q2TBE0 894 aaKnown RBP6.04□□□□□ -1.44
SF1-217ENST00000486960 WSCD2Q2TBF2 565 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ANO4Q32M45 955 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 FAM209AQ5JX71 171 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 AP1ARQ63HQ0 302 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ADGRD1Q6QNK2 874 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ANGPTL8Q6UXH0 198 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ARHGEF18Q6ZSZ5 1173 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 RFX8Q6ZV50 586 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 SV2BQ7L1I2 683 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ZER1Q7Z7L7 766 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 GALNT7Q86SF2 657 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 GALNT12Q8IXK2 581 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.04□□□□□ -1.44
SF1-217ENST00000486960 GOLGA6L1Q8N7Z2 621 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 AVL9Q8NBF6 648 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 FAM156AQ8NDB6 213 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 GPR152Q8TDT2 470 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 TRAPPC12Q8WVT3 735 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 SLC10A4Q96EP9 437 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 CCDC43Q96MW1 224 aaKnown RBP6.04□□□□□ -1.44
SF1-217ENST00000486960 PPP1R16BQ96T49 567 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 GAS2L1Q99501 681 aaPredicted RBP6.04□□□□□ -1.44
SF1-217ENST00000486960 STK31Q9BXU1 1019 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 LRRC3Q9BY71 257 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 C2orf40Q9H1Z8 148 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 NCOR1P1Q9H4R4 102 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ZFYVE28Q9HCC9 887 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 NPHS2Q9NP85 383 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ITM2CQ9NQX7 267 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 INTS10Q9NVR2 710 aaKnown RBP6.04□□□□□ -1.44
SF1-217ENST00000486960 RTEL1Q9NZ71 1219 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 GPRC5BQ9NZH0 403 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 ZNF624Q9P2J8 865 aaPredicted RBP6.04□□□□□ -1.44
SF1-217ENST00000486960 RASAL2Q9UJF2 1139 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 FLT4P35916 1363 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 KIF20BQ96Q89 1820 aa6.04□□□□□ -1.44
SF1-217ENST00000486960 DOPEY1Q5JWR5 2465 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 A0A087WV62 115 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 TRBV23-1A0A0A0MS06 115 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 PRR23AA6NEV1 266 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 A6NHS1 94 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 A6NNZ2 444 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 F8W031 263 aaPredicted RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 TK2O00142 265 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 AGRPO00253 132 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 ZBTB14O43829 449 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 GOSR1O95249 250 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 ATP1A3P13637 1013 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 CD9P21926 228 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 RPS12P25398 132 aaKnown RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 RDXP35241 583 aaKnown RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 LIG3P49916 1009 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 PTPN5P54829 565 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 GPR85P60893 370 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 KRT85P78386 507 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 IL1RL1Q01638 556 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 ZNF252P-AS1Q0IIN9 211 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 KLF1Q13351 362 aaPredicted RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 NCAPHQ15003 741 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 PPA1Q15181 289 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 KIAA0753Q2KHM9 967 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 SHROOM1Q2M3G4 852 aaPredicted RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 C11orf91Q3C1V1 193 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 INAVAQ3KP66 663 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 MMEL1Q495T6 779 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 OTUD7BQ6GQQ9 843 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 PGBD2Q6P3X8 592 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 SYNE3Q6ZMZ3 975 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 GBP6Q6ZN66 633 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 ARMC9Q7Z3E5 817 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 PPP1R42Q7Z4L9 355 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 DNAJB7Q7Z6W7 309 aaPredicted RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 PACS2Q86VP3 889 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 TMTC1Q8IUR5 882 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 NUP93Q8N1F7 819 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 ANKLE1Q8NAG6 615 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 ZMIZ2Q8NF64 920 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 GOT1L1Q8NHS2 421 aaPredicted RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 DENND1AQ8TEH3 1009 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 ARL8AQ96BM9 186 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 ZNF845Q96IR2 970 aaPredicted RBP6.03□□□□□ -1.44
SF1-217ENST00000486960 FAXDC2Q96IV6 333 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 PIGSQ96S52 555 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 EYA3Q99504 573 aa6.03□□□□□ -1.44
SF1-217ENST00000486960 TEX13BQ9BXU2 312 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms