RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 INTS8Q75QN2 995 aaKnown RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 GLIS1Q8NBF1 620 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 PLEKHO2Q8TD55 490 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 KIAA1551Q9HCM1 1747 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 IFNB1P01574 187 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 MMP14P50281 582 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 TUBP50607 506 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 MIGA2Q7L4E1 593 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 NKIRAS1Q9NYS0 192 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 NENFQ9UMX5 172 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 PITPNM2Q9BZ72 1349 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 RARGP13631 454 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 KRT10P13645 584 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ATP2A2P16615 1042 aaKnown RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ITIH4Q14624 930 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 HYIQ5T013 277 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 GPATCH4Q5T3I0 446 aaKnown RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 PRR5LQ6MZQ0 368 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ZNF720Q7Z2F6 126 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 CBWD2Q8IUF1 395 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 L3MBTL3Q96JM7 780 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 SYNGAP1Q96PV0 1343 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 A0A0A6YYK5 440 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-211ENST00000486901 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 SLC16A4O15374 487 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 RTN2O75298 545 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 PEX5P50542 639 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 ZNF131P52739 623 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 GABPAQ06546 454 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-211ENST00000486901 UTP4Q969X6 686 aaKnown RBP13.23□□□□□ -0.29
HSPG2-211ENST00000486901 BORCS6Q96GS4 357 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 EYA4O95677 639 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 GH2P01242 217 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 RRM1P23921 792 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 ANKMY2Q8IV38 441 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 SEMA4DQ92854 862 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 OSBPL1AQ9BXW6 950 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 TMEM117Q9H0C3 514 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 PIDD1Q9HB75 910 aa13.23□□□□□ -0.29
HSPG2-211ENST00000486901 AP1G2O75843 785 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 NDUFB10O96000 172 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 BCRP11274 1271 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 GM2AP17900 193 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 VAV3Q9UKW4 847 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 ARL2BPQ9Y2Y0 163 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 BHMG1C9JSJ3 638 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-211ENST00000486901 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 NOP14P78316 857 aaKnown RBP13.22□□□□□ -0.29
HSPG2-211ENST00000486901 LXNQ9BS40 222 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 KIAA1683Q9H0B3 1180 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 VPS37BQ9H9H4 285 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 EBF2Q9HAK2 575 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 NINJ2Q9NZG7 142 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 CFHP08603 1231 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-211ENST00000486901 RALAP11233 206 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 ATF2P15336 505 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-211ENST00000486901 CPA2P48052 419 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 VAMP7P51809 220 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 RWDD2BP57060 319 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 PLCB3Q01970 1234 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 BNIP1Q12981 228 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-211ENST00000486901 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 C1orf186Q6ZWK4 172 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 CENPTQ96BT3 561 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 KREMEN1Q96MU8 473 aa13.22□□□□□ -0.29
HSPG2-211ENST00000486901 PODXLO00592 558 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 TP73O15350 636 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 MAPK4P31152 587 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 PEX3P56589 373 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-211ENST00000486901 SLMAPQ14BN4 828 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 SMAD1Q15797 465 aaKnown RBP13.21□□□□□ -0.29
HSPG2-211ENST00000486901 ISLR2Q6UXK2 745 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 EIF1ADQ8N9N8 165 aaKnown RBP13.21□□□□□ -0.29
HSPG2-211ENST00000486901 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 ART4Q93070 314 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 NUDCD1Q96RS6 583 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
HSPG2-211ENST00000486901 NPHS2Q9NP85 383 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 SAYSD1Q9NPB0 183 aa13.21□□□□□ -0.29
HSPG2-211ENST00000486901 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms