RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	PRPF38B	Q5VTL8	546 aa	Known RBP	13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	CENPP	Q6IPU0	288 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	ARMCX5	Q6P1M9	558 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	SPRED2	Q7Z698	418 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	CBWD2	Q8IUF1	395 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	MLKL	Q8NB16	471 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	GSTCD	Q8NEC7	633 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	NELFB	Q8WX92	580 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	CASD1	Q96PB1	797 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	GAD1	Q99259	594 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	DUSP9	Q99956	384 aa	Known RBP	13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	ADPGK	Q9BRR6	497 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	FAM213A	Q9BRX8	229 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	ELAC1	Q9H777	363 aa	Known RBP	13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	TYW1	Q9NV66	732 aa	Known RBP	13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	ANO10	Q9NW15	660 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	DMAC2	Q9NW81	257 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	HSPBP1	Q9NZL4	362 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	LRFN2	Q9ULH4	789 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	PLAGL2	Q9UPG8	496 aa		13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	YBX2	Q9Y2T7	364 aa	Known RBP	13.85	□□□□□ -0.19
HDAC7-223	ENST00000485796	TBKBP1	A7MCY6	615 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	PDXK	O00764	312 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	PSMA7	O14818	248 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	OGT	O15294	1046 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	EOMES	O95936	686 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	ADRB2	P07550	413 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	CCDC192	P0DO97	292 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	CXCL8	P10145	99 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	GART	P22102	1010 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	PPP1R2	P41236	205 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	CASP4	P49662	377 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	SPAG1	Q07617	926 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	ENOX2	Q16206	610 aa	Known RBP	13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	SLC10A6	Q3KNW5	377 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	SLFN12L	Q6IEE8	588 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	LRRC55	Q6ZSA7	311 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	RDH13	Q8NBN7	331 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	PHOSPHO2	Q8TCD6	241 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	NOC3L	Q8WTT2	800 aa	Known RBP	13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	P2RX5	Q93086	422 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	ZNF689	Q96CS4	500 aa	Predicted RBP	13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	SLC9A7	Q96T83	725 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	FUCA2	Q9BTY2	467 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	DACH1	Q9UI36	760 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	CPSF3	Q9UKF6	684 aa	Known RBP	13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	TRAF3IP3	Q9Y228	551 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	INPP5F	Q9Y2H2	1132 aa		13.84	□□□□□ -0.19
HDAC7-223	ENST00000485796	ARL5C	A6NH57	179 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	LACTBL1	A8MY62	500 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	PTGES	O14684	152 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	CALU	O43852	315 aa	Predicted RBP	13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	POMC	P01189	267 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	NR3C1	P04150	777 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	IGFBP6	P24592	240 aa	Predicted RBP	13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	CCNE1	P24864	410 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	MLH1	P40692	756 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	SCNN1G	P51170	649 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	HTRA4	P83105	476 aa	Predicted RBP	13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	PAK1	Q13153	545 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	GLRA4	Q5JXX5	417 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	SCARA3	Q6AZY7	606 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	TTI2	Q6NXR4	508 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	ALKAL1	Q6UXT8	129 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	HS2ST1	Q7LGA3	356 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	C12orf56	Q8IXR9	622 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	PLEKHO2	Q8TD55	490 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	PGBD4	Q96DM1	585 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZMAT2	Q96NC0	199 aa	Known RBP	13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	ACAP3	Q96P50	834 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	TSG101	Q99816	390 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	DNAJC25	Q9H1X3	360 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	MTIF3	Q9H2K0	278 aa	Known RBP	13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	RSAD1	Q9HA92	442 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	CACNG4	Q9UBN1	327 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	TRIP11	Q15643	1979 aa		13.83	□□□□□ -0.2
HDAC7-223	ENST00000485796	EXTL3	O43909	919 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	CLTA	P09496	248 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	SKI	P12755	728 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	ANO6	Q4KMQ2	910 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZNF280B	Q86YH2	543 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	GPD1L	Q8N335	351 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	GOLGA5	Q8TBA6	731 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	SNX27	Q96L92	541 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	FBXL18	Q96ME1	805 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	ZBED2	Q9BTP6	218 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	CCDC94	Q9BW85	323 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	PBX4	Q9BYU1	374 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	GIT1	Q9Y2X7	761 aa		13.82	□□□□□ -0.2
HDAC7-223	ENST00000485796	CIT	O14578	2027 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	TTC26	A0AVF1	554 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	BICDL2	A1A5D9	508 aa		13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	TULP1	O00294	542 aa	Predicted RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	SOX1	O00570	391 aa	Predicted RBP	13.81	□□□□□ -0.2
HDAC7-223	ENST00000485796	TLL1	O43897	1013 aa		13.81	□□□□□ -0.2

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