RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 EXTL3O43909 919 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 ZSCAN20P17040 1043 aaPredicted RBP23.74■■□□□ 1.39
NECAB3-211ENST00000485399 EEF1GP26641 437 aaKnown RBP23.74■■□□□ 1.39
NECAB3-211ENST00000485399 CCDC40Q4G0X9 1142 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 IRF2BP1Q8IU81 584 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 FAM186BQ8IYM0 893 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 ANKRD20A12PQ8NF67 263 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 MYLIPQ8WY64 445 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 SAAL1Q96ER3 474 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 FBXL18Q96ME1 805 aa23.74■■□□□ 1.39
NECAB3-211ENST00000485399 METTL14Q9HCE5 456 aaKnown RBP23.74■■□□□ 1.39
NECAB3-211ENST00000485399 TMEM265A0A087WTH1 108 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 FSD2A1L4K1 749 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 KCNJ18B7U540 433 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 NBNO60934 754 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 AKAP3O75969 853 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 HARSP12081 509 aaKnown RBP23.73■■□□□ 1.39
NECAB3-211ENST00000485399 RFC2P35250 354 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 CASP4P49662 377 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 CCL23P55773 120 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 KCNJ12Q14500 433 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 HSP90AA4PQ58FG1 418 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 TCP11X2Q5H9J9 407 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 FRMD5Q7Z6J6 570 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 CNOT6LQ96LI5 555 aaKnown RBP23.73■■□□□ 1.39
NECAB3-211ENST00000485399 FAM213AQ9BRX8 229 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 IFIH1Q9BYX4 1025 aaKnown RBP23.73■■□□□ 1.39
NECAB3-211ENST00000485399 WNT8AQ9H1J5 351 aa23.73■■□□□ 1.39
NECAB3-211ENST00000485399 GOLGA8IPA6NC78 632 aa23.72■■□□□ 1.39
NECAB3-211ENST00000485399 ZNF233A6NK53 670 aa23.72■■□□□ 1.39
NECAB3-211ENST00000485399 GOLGA8JA6NMD2 632 aa23.72■■□□□ 1.39
NECAB3-211ENST00000485399 MARSP56192 900 aaKnown RBP23.72■■□□□ 1.39
NECAB3-211ENST00000485399 TWF2Q6IBS0 349 aaKnown RBP23.72■■□□□ 1.39
NECAB3-211ENST00000485399 MFSD5Q6N075 450 aa23.72■■□□□ 1.39
NECAB3-211ENST00000485399 CREBRFQ8IUR6 639 aa23.72■■□□□ 1.39
NECAB3-211ENST00000485399 RDH13Q8NBN7 331 aa23.72■■□□□ 1.39
NECAB3-211ENST00000485399 MAFAQ8NHW3 353 aaPredicted RBP23.72■■□□□ 1.39
NECAB3-211ENST00000485399 SCLYQ96I15 445 aa23.72■■□□□ 1.39
NECAB3-211ENST00000485399 TRIM6Q9C030 488 aaPredicted RBP23.72■■□□□ 1.39
NECAB3-211ENST00000485399 NPTXRO95502 500 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 DSC3Q14574 896 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 GPNMBQ14956 572 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 SNRNP35Q16560 246 aaKnown RBP23.71■■□□□ 1.39
NECAB3-211ENST00000485399 PLEKHG4Q58EX7 1191 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 C16orf59Q7L2K0 433 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 ZSWIM2Q8NEG5 633 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 SEPT8Q92599 483 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 APBB2Q92870 758 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.71■■□□□ 1.396e-7■■□□□ 11.6
NECAB3-211ENST00000485399 FTHL17Q9BXU8 183 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 TMX1Q9H3N1 280 aa23.71■■□□□ 1.39
NECAB3-211ENST00000485399 ARMCX3Q9UH62 379 aaPredicted RBP23.71■■□□□ 1.39
NECAB3-211ENST00000485399 FAM189A1O60320 539 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 CXCL10P02778 98 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 ATP1A3P13637 1013 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 KRT13P13646 458 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 MTIF2P46199 727 aaKnown RBP23.7■■□□□ 1.38
NECAB3-211ENST00000485399 ACOT2P49753 483 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 POU5F1Q01860 360 aaKnown RBP23.7■■□□□ 1.38
NECAB3-211ENST00000485399 UBXN11Q5T124 520 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 INTS8Q75QN2 995 aaKnown RBP23.7■■□□□ 1.38
NECAB3-211ENST00000485399 CBWD2Q8IUF1 395 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 THNSL1Q8IYQ7 743 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 EIF2AQ9BY44 585 aaKnown RBP23.7■■□□□ 1.38
NECAB3-211ENST00000485399 GRPEL1Q9HAV7 217 aa23.7■■□□□ 1.38
NECAB3-211ENST00000485399 LIMA1Q9UHB6 759 aaKnown RBP23.7■■□□□ 1.38
NECAB3-211ENST00000485399 SCN5AQ14524 2016 aa23.69■■□□□ 1.38
NECAB3-211ENST00000485399 CLTAP09496 248 aa23.69■■□□□ 1.38
NECAB3-211ENST00000485399 DNAJB2P25686 324 aa23.69■■□□□ 1.38
NECAB3-211ENST00000485399 GRM5P41594 1212 aa23.69■■□□□ 1.38
NECAB3-211ENST00000485399 CRELD2Q6UXH1 353 aaPredicted RBP23.69■■□□□ 1.38
NECAB3-211ENST00000485399 BORCS6Q96GS4 357 aa23.69■■□□□ 1.38
NECAB3-211ENST00000485399 MFSD14AQ96MC6 490 aa23.69■■□□□ 1.38
NECAB3-211ENST00000485399 TRAIPQ9BWF2 469 aa23.69■■□□□ 1.38
NECAB3-211ENST00000485399 CPSF3Q9UKF6 684 aaKnown RBP23.69■■□□□ 1.38
NECAB3-211ENST00000485399 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.68■■□□□ 1.38
NECAB3-211ENST00000485399 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.68■■□□□ 1.38
NECAB3-211ENST00000485399 LRRC10BA6NIK2 292 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 TPM2P07951 284 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 SKIP12755 728 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 RAB27AP51159 221 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 ENPEPQ07075 957 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 CYP24A1Q07973 514 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 TMEM240Q5SV17 173 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 RASIP1Q5U651 963 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 USP37Q86T82 979 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 TMEM199Q8N511 208 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 DBF4BQ8NFT6 615 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 ADAM2Q99965 735 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 TUBGCP2Q9BSJ2 902 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 CCDC94Q9BW85 323 aaPredicted RBP23.68■■□□□ 1.38
NECAB3-211ENST00000485399 REV3LO60673 3130 aa23.68■■□□□ 1.38
NECAB3-211ENST00000485399 MGEA5O60502 916 aa23.67■■□□□ 1.38
NECAB3-211ENST00000485399 SERPINC1P01008 464 aa23.67■■□□□ 1.38
NECAB3-211ENST00000485399 ADRB2P07550 413 aa23.67■■□□□ 1.38
NECAB3-211ENST00000485399 STAG3L1P0CL83 205 aa23.67■■□□□ 1.38
NECAB3-211ENST00000485399 FANCCQ00597 558 aa23.67■■□□□ 1.38
NECAB3-211ENST00000485399 PPP2R3AQ06190 1150 aa23.67■■□□□ 1.38
NECAB3-211ENST00000485399 PPIGQ13427 754 aaKnown RBP eCLIP23.67■■□□□ 1.389e-10■■■■□ 19.7
NECAB3-211ENST00000485399 KRT31Q15323 416 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms