RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 FAM189A1O60320 539 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 CXCL8P10145 99 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 GARTP22102 1010 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 PMS1P54277 932 aaKnown RBP19.45■□□□□ 0.7
CPNE1-224ENST00000483359 SKOR2Q2VWA4 1001 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-224ENST00000483359 HSPBP1Q9NZL4 362 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 HCSTQ9UBK5 93 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 CDH23Q9H251 3354 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 TRIOBPQ9H2D6 2365 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 LCHNA4D1U4 455 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 PPP1R3GB7ZBB8 358 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 GLB1LQ6UWU2 654 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 EEF2KMTQ96G04 330 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 ACAP3Q96P50 834 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 RNF216Q9NWF9 866 aaPredicted RBP19.44■□□□□ 0.7
CPNE1-224ENST00000483359 FNDC1Q4ZHG4 1894 aaPredicted RBP19.44■□□□□ 0.7
CPNE1-224ENST00000483359 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.44■□□□□ 0.7
CPNE1-224ENST00000483359 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.44■□□□□ 0.7
CPNE1-224ENST00000483359 ARL5CA6NH57 179 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 PDXKO00764 312 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 PSMA7O14818 248 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 POMCP01189 267 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 YARSP54577 528 aaKnown RBP19.44■□□□□ 0.7
CPNE1-224ENST00000483359 COBLL1Q53SF7 1204 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 GLRA4Q5JXX5 417 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 RDH13Q8NBN7 331 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 FAM212AQ96EL1 285 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 PBX4Q9BYU1 374 aa19.44■□□□□ 0.7
CPNE1-224ENST00000483359 GTPBP4Q9BZE4 634 aaKnown RBP19.44■□□□□ 0.7
CPNE1-224ENST00000483359 RC3H2Q9HBD1 1191 aaKnown RBP19.44■□□□□ 0.7
CPNE1-224ENST00000483359 HOXA2O43364 376 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 CALUO43852 315 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 OFD1O75665 1012 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 NR3C1P04150 777 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 SCNN1GP51170 649 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 STX17P56962 302 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 NLRP12P59046 1061 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 BTG3Q14201 252 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 GOLGA5Q8TBA6 731 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 NELFBQ8WX92 580 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 CASD1Q96PB1 797 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 RAD9AQ99638 391 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 CPSF3Q9UKF6 684 aaKnown RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 INSL6Q9Y581 213 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 SYCE3A1L190 88 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 MEFVO15553 781 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 HTRA4P83105 476 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 SPAG1Q07617 926 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 GPD1LQ8N335 351 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 P2RX5Q93086 422 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 ZNF689Q96CS4 500 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 RPS6KC1Q96S38 1066 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 TMEM117Q9H0C3 514 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 UBN1Q9NPG3 1134 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 TOPORSQ9NS56 1045 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 TRAF3IP3Q9Y228 551 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 YBX2Q9Y2T7 364 aaKnown RBP19.43■□□□□ 0.7
CPNE1-224ENST00000483359 GIT1Q9Y2X7 761 aa19.43■□□□□ 0.7
CPNE1-224ENST00000483359 A0A1W2PPC1 479 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 CA3P07451 260 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 CLTAP09496 248 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 NR2F2P24468 414 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 ENOX2Q16206 610 aaKnown RBP19.42■□□□□ 0.7
CPNE1-224ENST00000483359 ZCWPW2Q504Y3 356 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 ANKRD40Q6AI12 368 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 CRELD2Q6UXH1 353 aaPredicted RBP19.42■□□□□ 0.7
CPNE1-224ENST00000483359 CBWD2Q8IUF1 395 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 SNX27Q96L92 541 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 RPF1Q9H9Y2 349 aaKnown RBP19.42■□□□□ 0.7
CPNE1-224ENST00000483359 PLAGL2Q9UPG8 496 aa19.42■□□□□ 0.7
CPNE1-224ENST00000483359 CITO14578 2027 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 EXTL3O43909 919 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 EXOC3O60645 756 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 SNRPFP62306 86 aaKnown RBP19.41■□□□□ 0.7
CPNE1-224ENST00000483359 PAK1Q13153 545 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 NOMO2Q5JPE7 1267 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 CEP135Q66GS9 1140 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 CENPPQ6IPU0 288 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 XXYLT1Q8NBI6 393 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 URGCPQ8TCY9 931 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 DHTKD1Q96HY7 919 aaPredicted RBP19.41■□□□□ 0.7
CPNE1-224ENST00000483359 TSG101Q99816 390 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 MIOSQ9NXC5 875 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 CGNQ9P2M7 1197 aaKnown RBP19.41■□□□□ 0.7
CPNE1-224ENST00000483359 ARHGEF15O94989 841 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 CCNE1P24864 410 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 PPP1R2P41236 205 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 RNASELQ05823 741 aaKnown RBP19.41■□□□□ 0.7
CPNE1-224ENST00000483359 PPP2R3AQ06190 1150 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 SLC10A6Q3KNW5 377 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 MLKLQ8NB16 471 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 GSTCDQ8NEC7 633 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 TBC1D13Q9NVG8 400 aa19.41■□□□□ 0.7
CPNE1-224ENST00000483359 RBAKQ9NYW8 714 aaPredicted RBP19.41■□□□□ 0.7
CPNE1-224ENST00000483359 TRIP11Q15643 1979 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 PTGESO14684 152 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 LDHAP00338 332 aaKnown RBP19.4■□□□□ 0.7
CPNE1-224ENST00000483359 CASP4P49662 377 aa19.4■□□□□ 0.7
CPNE1-224ENST00000483359 SNRNP35Q16560 246 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms