RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 KLHL23Q8NBE8 558 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 GSTCDQ8NEC7 633 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 ERCC4Q92889 916 aaPredicted RBP22.26■■□□□ 1.15
CTSA-206ENST00000480961 HVCN1Q96D96 273 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 NRDE2Q9H7Z3 1164 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 ALG13Q9NP73 1137 aaKnown RBP22.26■■□□□ 1.15
CTSA-206ENST00000480961 EXOC1Q9NV70 894 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 PLAGL2Q9UPG8 496 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 LPXNO60711 386 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 ABCD1P33897 745 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 HOXD13P35453 343 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 BCAR1P56945 870 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 POSTNQ15063 836 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 KCNT2Q6UVM3 1135 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 MSTO1Q9BUK6 570 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 CCDC94Q9BW85 323 aaPredicted RBP22.25■■□□□ 1.15
CTSA-206ENST00000480961 PCDHB12Q9Y5F1 795 aa22.25■■□□□ 1.15
CTSA-206ENST00000480961 A0A0B4J269 797 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 H3BNC9 293 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 GRM6O15303 877 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 MEFVO15553 781 aaPredicted RBP22.24■■□□□ 1.15
CTSA-206ENST00000480961 LAG3P18627 525 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 UBE2HP62256 183 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 STK4Q13043 487 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 ALCAMQ13740 583 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 GLRA4Q5JXX5 417 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 KANK3Q6NY19 840 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 EPM2AIP1Q7L775 607 aaPredicted RBP22.24■■□□□ 1.15
CTSA-206ENST00000480961 NELFCDQ8IXH7 590 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 SCFD1Q8WVM8 642 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 ZNF558Q96NG5 402 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 ACAP3Q96P50 834 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 FAM193BQ96PV7 902 aaPredicted RBP22.24■■□□□ 1.15
CTSA-206ENST00000480961 RPS6KC1Q96S38 1066 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 GAS2L1Q99501 681 aaPredicted RBP22.24■■□□□ 1.15
CTSA-206ENST00000480961 AAASQ9NRG9 546 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 KANSL3Q9P2N6 904 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 EXOC7Q9UPT5 735 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 RWDD3Q9Y3V2 267 aa22.24■■□□□ 1.15
CTSA-206ENST00000480961 C5orf67F2Z3F1 127 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 PTGESO14684 152 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 INPPL1O15357 1258 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 ITGB1P05556 798 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 MYL1P05976 194 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 RB1P06400 928 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 FOSL2P15408 326 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 ADSSP30520 456 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 TNFSF9P41273 254 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 SLC11A1P49279 550 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 YARSP54577 528 aaKnown RBP22.23■■□□□ 1.15
CTSA-206ENST00000480961 CLEC17AQ6ZS10 378 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 STXBP4Q6ZWJ1 553 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 ZNF507Q8TCN5 953 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 POMGNT1Q8WZA1 660 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 RABGGTAQ92696 567 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 CACNG4Q9UBN1 327 aa22.23■■□□□ 1.15
CTSA-206ENST00000480961 TULP1O00294 542 aaPredicted RBP22.22■■□□□ 1.15
CTSA-206ENST00000480961 KINO60870 393 aaKnown RBP22.22■■□□□ 1.15
CTSA-206ENST00000480961 FGF18O76093 207 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 GALTP07902 379 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 ALDH7A1P49419 539 aaKnown RBP22.22■■□□□ 1.15
CTSA-206ENST00000480961 ACOT2P49753 483 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 TMEM173Q86WV6 379 aaPredicted RBP22.22■■□□□ 1.15
CTSA-206ENST00000480961 MICALL1Q8N3F8 863 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 KIAA0895Q8NCT3 520 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 ZSWIM2Q8NEG5 633 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 CCDC34Q96HJ3 373 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 TIGD1Q96MW7 591 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 C11orf84Q9BUA3 381 aaPredicted RBP22.22■■□□□ 1.15
CTSA-206ENST00000480961 PLVAPQ9BX97 442 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 PCIF1Q9H4Z3 704 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 TMEM206Q9H813 350 aa22.22■■□□□ 1.15
CTSA-206ENST00000480961 MYH11P35749 1972 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 OGTO15294 1046 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 FAM189A1O60320 539 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 CLTAP09496 248 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 CXCL8P10145 99 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 DNAJB1P25685 340 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 OR1G1P47890 313 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 SPAG1Q07617 926 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 SLC10A6Q3KNW5 377 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 SLFN12LQ6IEE8 588 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 SPPL3Q8TCT6 385 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 BCL7CQ8WUZ0 217 aaPredicted RBP22.21■■□□□ 1.15
CTSA-206ENST00000480961 SAAL1Q96ER3 474 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 SPG21Q9NZD8 308 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 AGO2Q9UKV8 859 aaKnown RBP22.21■■□□□ 1.15
CTSA-206ENST00000480961 PRG3Q9Y2Y8 225 aaPredicted RBP22.21■■□□□ 1.15
CTSA-206ENST00000480961 STYXL1Q9Y6J8 313 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 ZMYM2Q9UBW7 1377 aa22.21■■□□□ 1.15
CTSA-206ENST00000480961 F8W810 466 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 EIF3DO15371 548 aaKnown RBP eCLIP22.2■■□□□ 1.14
CTSA-206ENST00000480961 CCDC85BQ15834 202 aaPredicted RBP22.2■■□□□ 1.14
CTSA-206ENST00000480961 ALKAL1Q6UXT8 129 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 COLGALT2Q8IYK4 626 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 SLC39A11Q8N1S5 342 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 NOC3LQ8WTT2 800 aaKnown RBP22.2■■□□□ 1.14
CTSA-206ENST00000480961 PPM1EQ8WY54 764 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 RSPH1Q8WYR4 309 aa22.2■■□□□ 1.14
CTSA-206ENST00000480961 CCDC47Q96A33 483 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms