RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PARD3BQ8TEW8 1205 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 CCDC127Q96BQ5 260 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 TOX2Q96NM4 488 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 RBAKQ9NYW8 714 aaPredicted RBP19.11■□□□□ 0.65
UPF3A-206ENST00000480362 SQORQ9Y6N5 450 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 STAG3L1P0CL83 205 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 SELPP16109 830 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 CD52P31358 61 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 OSTNP61366 133 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 TLE2Q04725 743 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 ENPEPQ07075 957 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 PSMD6Q15008 389 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 KYAT1Q16773 422 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 BRSK2Q8IWQ3 736 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 USP38Q8NB14 1042 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 EIF2AQ9BY44 585 aaKnown RBP19.1■□□□□ 0.65
UPF3A-206ENST00000480362 ERVK-5Q9HDB9 667 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 CENPFP49454 3210 aa19.1■□□□□ 0.65
UPF3A-206ENST00000480362 A0A1W2PQC6 194 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 LRRIQ3A6PVS8 624 aaPredicted RBP19.09■□□□□ 0.65
UPF3A-206ENST00000480362 CLTAP09496 248 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 FMO5P49326 533 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 FAAP100Q0VG06 881 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 PAK2Q13177 524 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 SYCP1Q15431 976 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 UBXN11Q5T124 520 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 LRRC8DQ7L1W4 858 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 NECAB2Q7Z6G3 386 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 USP37Q86T82 979 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 TMEM192Q8IY95 271 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 CCDC51Q96ER9 411 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 ERGIC2Q96RQ1 377 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 FNBP1Q96RU3 617 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 POP1Q99575 1024 aaKnown RBP19.09■□□□□ 0.65
UPF3A-206ENST00000480362 MMRN2Q9H8L6 949 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 RPF1Q9H9Y2 349 aaKnown RBP19.09■□□□□ 0.65
UPF3A-206ENST00000480362 PDE11AQ9HCR9 933 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 CHST12Q9NRB3 414 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 PADI3Q9ULW8 664 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 ATP11BQ9Y2G3 1177 aa19.09■□□□□ 0.65
UPF3A-206ENST00000480362 STX10O60499 249 aa19.08■□□□□ 0.64
UPF3A-206ENST00000480362 DLATP10515 647 aaKnown RBP19.08■□□□□ 0.64
UPF3A-206ENST00000480362 GRM5P41594 1212 aa19.08■□□□□ 0.64
UPF3A-206ENST00000480362 WNT7BP56706 349 aa19.08■□□□□ 0.64
UPF3A-206ENST00000480362 PPP3CAQ08209 521 aa19.08■□□□□ 0.64
UPF3A-206ENST00000480362 KCNMA1Q12791 1236 aa19.08■□□□□ 0.64
UPF3A-206ENST00000480362 SPECC1LQ69YQ0 1117 aa19.08■□□□□ 0.64
UPF3A-206ENST00000480362 FAM212AQ96EL1 285 aa19.08■□□□□ 0.64
UPF3A-206ENST00000480362 PCMTD1Q96MG8 357 aaPredicted RBP19.08■□□□□ 0.64
UPF3A-206ENST00000480362 PITPNM1O00562 1244 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 GCLMP48507 274 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 KLK7P49862 253 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 POU5F1Q01860 360 aaKnown RBP19.07■□□□□ 0.64
UPF3A-206ENST00000480362 MBTPS1Q14703 1052 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 SURF1Q15526 300 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 ENOX2Q16206 610 aaKnown RBP19.07■□□□□ 0.64
UPF3A-206ENST00000480362 LRRC26Q2I0M4 334 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 CBWD6Q4V339 395 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 CBWD3Q5JTY5 395 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 CBWD5Q5RIA9 395 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 TWF2Q6IBS0 349 aaKnown RBP19.07■□□□□ 0.64
UPF3A-206ENST00000480362 ACAP3Q96P50 834 aa19.07■□□□□ 0.64
UPF3A-206ENST00000480362 CCDC94Q9BW85 323 aaPredicted RBP19.07■□□□□ 0.64
UPF3A-206ENST00000480362 TRIM6Q9C030 488 aaPredicted RBP19.07■□□□□ 0.64
UPF3A-206ENST00000480362 TOPORSQ9NS56 1045 aaPredicted RBP19.07■□□□□ 0.64
UPF3A-206ENST00000480362 ITIH6Q6UXX5 1313 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 N4BP1O75113 896 aaKnown RBP19.06■□□□□ 0.64
UPF3A-206ENST00000480362 CXCL8P10145 99 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 ZSCAN20P17040 1043 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-206ENST00000480362 TNNI1P19237 187 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 EN2P19622 333 aaPredicted RBP19.06■□□□□ 0.64
UPF3A-206ENST00000480362 GTF2H1P32780 548 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 CLDN10P78369 228 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 GBP6Q6ZN66 633 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 ZNF516Q92618 1163 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 CGRRF1Q99675 332 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 CRACR2AQ9BSW2 395 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 TMEM117Q9H0C3 514 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 TMX1Q9H3N1 280 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 HIPK3Q9H422 1215 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 SNTG2Q9NY99 539 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 IMPACTQ9P2X3 320 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 SIK3Q9Y2K2 1263 aa19.06■□□□□ 0.64
UPF3A-206ENST00000480362 UMODL1Q5DID0 1318 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 GTPBP10A4D1E9 387 aaKnown RBP19.05■□□□□ 0.64
UPF3A-206ENST00000480362 LACTBL1A8MY62 500 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 MEFVO15553 781 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-206ENST00000480362 IL18RAPO95256 599 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 MYL7Q01449 175 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 TBX2Q13207 712 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-206ENST00000480362 DSC3Q14574 896 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 SLC10A6Q3KNW5 377 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 LMBRD2Q68DH5 695 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-206ENST00000480362 TMEM8AQ9HCN3 771 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 HES2Q9Y543 173 aa19.05■□□□□ 0.64
UPF3A-206ENST00000480362 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.05■□□□□ 0.642e-6■■■■□ 22.8
UPF3A-206ENST00000480362 GOLGA6L6A8MZA4 724 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 PMM2O15305 246 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 P4HA2O15460 535 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms