RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 SCFD1Q8WVM8 642 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 ZFP42Q96MM3 310 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 ACAP3Q96P50 834 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 GSDMAQ96QA5 445 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 MSTO1Q9BUK6 570 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 PLVAPQ9BX97 442 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 CERS4Q9HA82 394 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 LMBRD1Q9NUN5 540 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 KLK14Q9P0G3 267 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 PCDHB12Q9Y5F1 795 aa27.32■■□□□ 1.96
PERM1-203ENST00000479361 OGTO15294 1046 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 RB1P06400 928 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 LINC00271P0C7V0 271 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 OSTNP61366 133 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 STK4Q13043 487 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 BMT2Q1RMZ1 405 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 Q7L0L9 218 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 CEP120Q8N960 986 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 FBXO22Q8NEZ5 403 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 POMGNT1Q8WZA1 660 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 SMARCE1Q969G3 411 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 FAM193BQ96PV7 902 aaPredicted RBP27.31■■□□□ 1.96
PERM1-203ENST00000479361 HAPLN2Q9GZV7 340 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 GBP3Q9H0R5 595 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 CWH43Q9H720 699 aa27.31■■□□□ 1.96
PERM1-203ENST00000479361 KIF20AO95235 890 aa27.3■■□□□ 1.96
PERM1-203ENST00000479361 POMCP01189 267 aa27.3■■□□□ 1.96
PERM1-203ENST00000479361 CLTAP09496 248 aa27.3■■□□□ 1.96
PERM1-203ENST00000479361 GRIN2CQ14957 1233 aa27.3■■□□□ 1.96
PERM1-203ENST00000479361 SPRED2Q7Z698 418 aa27.3■■□□□ 1.96
PERM1-203ENST00000479361 KIAA0895Q8NCT3 520 aa27.3■■□□□ 1.96
PERM1-203ENST00000479361 GTPBP4Q9BZE4 634 aaKnown RBP27.3■■□□□ 1.96
PERM1-203ENST00000479361 SZT2Q5T011 3432 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 TISP43B9A030 160 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 C5orf67F2Z3F1 127 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 GARTP22102 1010 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 SCNN1GP51170 649 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 AFF1P51825 1210 aaKnown RBP27.29■■□□□ 1.96
PERM1-203ENST00000479361 SNRPFP62306 86 aaKnown RBP27.29■■□□□ 1.96
PERM1-203ENST00000479361 GRIK3Q13003 919 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 SPATA20Q8TB22 786 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 ZNF558Q96NG5 402 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 C11orf84Q9BUA3 381 aaPredicted RBP27.29■■□□□ 1.96
PERM1-203ENST00000479361 IKZF4Q9H2S9 585 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 HCSTQ9UBK5 93 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 AGO2Q9UKV8 859 aaKnown RBP27.29■■□□□ 1.96
PERM1-203ENST00000479361 PCDHA5Q9Y5H7 936 aa27.29■■□□□ 1.96
PERM1-203ENST00000479361 HOXD13P35453 343 aa27.28■■□□□ 1.96
PERM1-203ENST00000479361 ALDH7A1P49419 539 aaKnown RBP27.28■■□□□ 1.96
PERM1-203ENST00000479361 KNOP1Q1ED39 458 aaKnown RBP27.28■■□□□ 1.96
PERM1-203ENST00000479361 HS2ST1Q7LGA3 356 aa27.28■■□□□ 1.96
PERM1-203ENST00000479361 NELFCDQ8IXH7 590 aa27.28■■□□□ 1.96
PERM1-203ENST00000479361 COLGALT1Q8NBJ5 622 aa27.28■■□□□ 1.96
PERM1-203ENST00000479361 GSTCDQ8NEC7 633 aa27.28■■□□□ 1.96
PERM1-203ENST00000479361 P2RX5Q93086 422 aa27.28■■□□□ 1.96
PERM1-203ENST00000479361 PRDM12Q9H4Q4 367 aa27.28■■□□□ 1.96
PERM1-203ENST00000479361 CGNQ9P2M7 1197 aaKnown RBP27.28■■□□□ 1.96
PERM1-203ENST00000479361 KIAA0391O15091 583 aaKnown RBP27.27■■□□□ 1.96
PERM1-203ENST00000479361 ZC3H11AO75152 810 aaKnown RBP eCLIP27.27■■□□□ 1.96
PERM1-203ENST00000479361 THP07101 528 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 ADSSP30520 456 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 PPM1AP35813 382 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 SEZ6Q53EL9 994 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 ARMCX5Q6P1M9 558 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 KCNT2Q6UVM3 1135 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 GOLGA5Q8TBA6 731 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 SNX27Q96L92 541 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 NRDE2Q9H7Z3 1164 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 PLEKHA5Q9HAU0 1116 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 MIOSQ9NXC5 875 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 MTMR10Q9NXD2 777 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 RALGAPA2Q2PPJ7 1873 aa27.27■■□□□ 1.96
PERM1-203ENST00000479361 CHD7Q9P2D1 2997 aa27.26■■□□□ 1.95
PERM1-203ENST00000479361 FAM189A1O60320 539 aa27.26■■□□□ 1.95
PERM1-203ENST00000479361 LDHAP00338 332 aaKnown RBP27.26■■□□□ 1.95
PERM1-203ENST00000479361 BCAR1P56945 870 aa27.26■■□□□ 1.95
PERM1-203ENST00000479361 ZNF280BQ86YH2 543 aa27.26■■□□□ 1.95
PERM1-203ENST00000479361 TMEM175Q9BSA9 504 aa27.26■■□□□ 1.95
PERM1-203ENST00000479361 RPF1Q9H9Y2 349 aaKnown RBP27.26■■□□□ 1.95
PERM1-203ENST00000479361 H3BNC9 293 aa27.25■■□□□ 1.95
PERM1-203ENST00000479361 PTGESO14684 152 aa27.25■■□□□ 1.95
PERM1-203ENST00000479361 POU5F1Q01860 360 aaKnown RBP27.25■■□□□ 1.95
PERM1-203ENST00000479361 XKR4Q5GH76 650 aa27.25■■□□□ 1.95
PERM1-203ENST00000479361 ALKAL1Q6UXT8 129 aa27.25■■□□□ 1.95
PERM1-203ENST00000479361 ERCC4Q92889 916 aaPredicted RBP27.25■■□□□ 1.95
PERM1-203ENST00000479361 GAS2L1Q99501 681 aaPredicted RBP27.25■■□□□ 1.95
PERM1-203ENST00000479361 CNTN3Q9P232 1028 aa27.25■■□□□ 1.95
PERM1-203ENST00000479361 CPSF3Q9UKF6 684 aaKnown RBP27.25■■□□□ 1.95
PERM1-203ENST00000479361 EPOPA6NHQ4 379 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 TGFB1I1O43294 461 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 DDHD2O94830 711 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 ALDH2P05091 517 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 CXCL8P10145 99 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 TNFSF9P41273 254 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 ACOT2P49753 483 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 DSC1Q08554 894 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 GPM6BQ13491 265 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 HSP90AA2PQ14568 343 aaPredicted RBP27.24■■□□□ 1.95
PERM1-203ENST00000479361 SLC10A6Q3KNW5 377 aa27.24■■□□□ 1.95
PERM1-203ENST00000479361 ZNF658Q5TYW1 1059 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms