RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ZNF280BQ86YH2 543 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 SYCP3Q8IZU3 236 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 GLIS3Q8NEA6 775 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF558Q96NG5 402 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 PTPRHQ9HD43 1115 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 UBN1Q9NPG3 1134 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 OLFML3Q9NRN5 406 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 EXOC1Q9NV70 894 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 DNAJB4Q9UDY4 337 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 GIT1Q9Y2X7 761 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 FAM237AA0A1B0GTK4 181 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 NT5C1B-RDH14C9J2C7 533 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 H3BNC9 293 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 ABLIM1O14639 778 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 B4GALT3O60512 393 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 LPXNO60711 386 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 PPP1R37O75864 691 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 PRPF6O94906 941 aaKnown RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 ITGB1P05556 798 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 MCF2P10911 925 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 SCP2P22307 547 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 PROZP22891 400 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 ABCD1P33897 745 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 ALDH7A1P49419 539 aaKnown RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 YARSP54577 528 aaKnown RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 BCAR1P56945 870 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 FAM160A1Q05DH4 1040 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 CCDC85BQ15834 202 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 GLRA4Q5JXX5 417 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 L1TD1Q5T7N2 865 aaKnown RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 SLC39A4Q6P5W5 647 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 KCNT2Q6UVM3 1135 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 KRBA2Q6ZNG9 492 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 FMR1NBQ8N0W7 255 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 NOC3LQ8WTT2 800 aaKnown RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 ACCSQ96QU6 501 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 MSTO1Q9BUK6 570 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 CCDC94Q9BW85 323 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-215ENST00000478531 HAPLN2Q9GZV7 340 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 NRDE2Q9H7Z3 1164 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 SLC39A2Q9NP94 309 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 CACNG4Q9UBN1 327 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 PCDHB13Q9Y5F0 798 aa7.54□□□□□ -1.2
BRCA1-215ENST00000478531 ANKRD63C9JTQ0 380 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 C5orf67F2Z3F1 127 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 GRM6O15303 877 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 NR1I2O75469 434 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 FGF18O76093 207 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 DDHD2O94830 711 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 CXCL8P10145 99 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 CA8P35219 290 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 GRM5P41594 1212 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 MCL1Q07820 350 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 ALCAMQ13740 583 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 CNNM4Q6P4Q7 775 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 STXBP4Q6ZWJ1 553 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 NELFCDQ8IXH7 590 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 MAFAQ8NHW3 353 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-215ENST00000478531 RSPH1Q8WYR4 309 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 POMGNT1Q8WZA1 660 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 RABGGTAQ92696 567 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 HVCN1Q96D96 273 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 ACAP3Q96P50 834 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PLVAPQ9BX97 442 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 ST6GALNAC4Q9H4F1 302 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 TOPORSQ9NS56 1045 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-215ENST00000478531 MIOSQ9NXC5 875 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 KANSL3Q9P2N6 904 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 EXOC7Q9UPT5 735 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 STXBP5LQ9Y2K9 1186 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PRG3Q9Y2Y8 225 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-215ENST00000478531 MTCH2Q9Y6C9 303 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 ZMYM2Q9UBW7 1377 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PVALEFA0A1B0GWK0 134 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 CASTOR2A6NHX0 329 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PTGESO14684 152 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 KLRC4O43908 158 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PIGRP01833 764 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 RPN1P04843 607 aaKnown RBP7.53□□□□□ -1.2
BRCA1-215ENST00000478531 RB1P06400 928 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PPM1AP35813 382 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 TNFSF9P41273 254 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 OR1G1P47890 313 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 SLC11A1P49279 550 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 GRIK3Q13003 919 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PNOCQ13519 176 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 SNW1Q13573 536 aaKnown RBP7.53□□□□□ -1.2
BRCA1-215ENST00000478531 POSTNQ15063 836 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 PTPROQ16827 1216 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 KMT5BQ4FZB7 885 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 ZBTB41Q5SVQ8 909 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 TMEM173Q86WV6 379 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-215ENST00000478531 GSTCDQ8NEC7 633 aa7.53□□□□□ -1.2
BRCA1-215ENST00000478531 POF1BQ8WVV4 589 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms