RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 ERC1Q8IUD2 1116 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 THNSL1Q8IYQ7 743 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 ZDHHC14Q8IZN3 488 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 AGGF1Q8N302 714 aaeCLIP7.11□□□□□ -1.27
LINC00173-202ENST00000477702 FEZF2Q8TBJ5 459 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 SYTL5Q8TDW5 730 aaPredicted RBP7.11□□□□□ -1.27
LINC00173-202ENST00000477702 NSUN6Q8TEA1 469 aaKnown RBP7.11□□□□□ -1.27
LINC00173-202ENST00000477702 DCAF4Q8WV16 495 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 RMDN3Q96TC7 470 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 CEP44Q9C0F1 390 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 ADAM7Q9H2U9 754 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 BCAS3Q9H6U6 928 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
LINC00173-202ENST00000477702 IL17RBQ9NRM6 502 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 TLR6Q9Y2C9 796 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 PCDHB12Q9Y5F1 795 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 CACNA1IQ9P0X4 2223 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 NBEAQ8NFP9 2946 aa7.11□□□□□ -1.27
LINC00173-202ENST00000477702 SPEGQ15772 3267 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 ASH1LQ9NR48 2969 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 MYH7BA7E2Y1 1941 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 FSD2A1L4K1 749 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 NARSO43776 548 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 KINO60870 393 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 EIF3JO75822 258 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 LGALS2P05162 132 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 CT47B1P0C2W7 299 aaPredicted RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 NME2P22392 152 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 ARNTP27540 789 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 CD52P31358 61 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 SP2Q02086 613 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 LMNB2Q03252 620 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 UBE3AQ05086 875 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 TDGQ13569 410 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 DUOXA2Q1HG44 320 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 CELF3Q5SZQ8 465 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 ARHGEF16Q5VV41 709 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 PCNX4Q63HM2 1172 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 ZSCAN25Q6NSZ9 544 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 IGF2-ASQ6U949 168 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 BTNL9Q6UXG8 535 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 ACAD11Q709F0 780 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 CLASRPQ8N2M8 674 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 OSBP2Q969R2 916 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 WDR89Q96FK6 387 aaPredicted RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 NECTIN4Q96NY8 510 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 TCF25Q9BQ70 676 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 CPVLQ9H3G5 476 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 EHMT1Q9H9B1 1298 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 AGO3Q9H9G7 860 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 CBX8Q9HC52 389 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 ENTPD7Q9NQZ7 604 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 DBR1Q9UK59 544 aaKnown RBP7.1□□□□□ -1.27
LINC00173-202ENST00000477702 CA14Q9ULX7 337 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 USP18Q9UMW8 372 aa7.1□□□□□ -1.27
LINC00173-202ENST00000477702 TSPY2A6NKD2 308 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 PRR5-ARHGAP8B1AHC4 643 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 M0R2C6 588 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 GPAA1O43292 621 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 GNAT1P11488 350 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 MYCLP12524 364 aaPredicted RBP7.09□□□□□ -1.27
LINC00173-202ENST00000477702 ATP5JP18859 108 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 UBA1P22314 1058 aaKnown RBP7.09□□□□□ -1.27
LINC00173-202ENST00000477702 ZNF76P36508 570 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 MTHFRP42898 656 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 CHRNA4P43681 627 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 LIG3P49916 1009 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 ARHGAP8P85298 464 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 ITIH3Q06033 890 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 FBXO47Q5MNV8 452 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 CEP85Q6P2H3 762 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 C1orf210Q8IVY1 113 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 TRMT2AQ8IZ69 625 aaKnown RBP7.09□□□□□ -1.27
LINC00173-202ENST00000477702 RASGRP4Q8TDF6 673 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 LMBR1Q8WVP7 490 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 CASP10Q92851 521 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 IWS1Q96ST2 819 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 RTKNQ9BST9 563 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 CCDC86Q9H6F5 360 aaKnown RBP7.09□□□□□ -1.27
LINC00173-202ENST00000477702 TBC1D17Q9HA65 648 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 MLXIPQ9HAP2 919 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 CYP26B1Q9NR63 512 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 GGT7Q9UJ14 662 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 PCDHB5Q9Y5E4 795 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 HCFC2Q9Y5Z7 792 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 CDY2AQ9Y6F7 541 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 KIAA1217Q5T5P2 1943 aa7.09□□□□□ -1.27
LINC00173-202ENST00000477702 WDR19Q8NEZ3 1342 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 ITPR1Q14643 2758 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 TBKBP1A7MCY6 615 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 SCAMP3O14828 347 aaKnown RBP7.08□□□□□ -1.28
LINC00173-202ENST00000477702 RANBP6O60518 1105 aaKnown RBP7.08□□□□□ -1.28
LINC00173-202ENST00000477702 EOMESO95936 686 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 CYP11A1P05108 521 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 SLC3A2P08195 630 aaKnown RBP7.08□□□□□ -1.28
LINC00173-202ENST00000477702 GSTP1P09211 210 aaKnown RBP7.08□□□□□ -1.28
LINC00173-202ENST00000477702 STAG3L1P0CL83 205 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 SCG2P13521 617 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 LIG1P18858 919 aa7.08□□□□□ -1.28
LINC00173-202ENST00000477702 CA8P35219 290 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms