RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 KCNA5P22460 613 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 ERCC5P28715 1186 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-211ENST00000476994 PUS10Q3MIT2 529 aaKnown RBP19.3■□□□□ 0.68
SREBF1-211ENST00000476994 KLHL10Q6JEL2 608 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 ZPBP2Q6X784 338 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 ZC3H3Q8IXZ2 948 aaKnown RBP19.3■□□□□ 0.68
SREBF1-211ENST00000476994 TMEM174Q8WUU8 243 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 NELFBQ8WX92 580 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 DUSP9Q99956 384 aaKnown RBP19.3■□□□□ 0.68
SREBF1-211ENST00000476994 TARS2Q9BW92 718 aaKnown RBP19.3■□□□□ 0.68
SREBF1-211ENST00000476994 HAPLN2Q9GZV7 340 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 GBP3Q9H0R5 595 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 AGPAT5Q9NUQ2 364 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 TYW1Q9NV66 732 aaKnown RBP19.3■□□□□ 0.68
SREBF1-211ENST00000476994 RPS6KA5O75582 802 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 KIF20AO95235 890 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
SREBF1-211ENST00000476994 ADSSP30520 456 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 STRN3Q13033 797 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 PAK1Q13153 545 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 STIM1Q13586 685 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 NFIL3Q16649 462 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 EEF1DP3Q658K8 133 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 ANKRD40Q6AI12 368 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 TSHZ1Q6ZSZ6 1077 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 C12orf56Q8IXR9 622 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 BPIFA3Q9BQP9 254 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 C11orf84Q9BUA3 381 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-211ENST00000476994 FTHL17Q9BXU8 183 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 MRPL4Q9BYD3 311 aaKnown RBP19.29■□□□□ 0.68
SREBF1-211ENST00000476994 AGPAT3Q9NRZ7 376 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 DACH1Q9UI36 760 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 RWDD2AQ9UIY3 292 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 ST3GAL5Q9UNP4 418 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 EXOC7Q9UPT5 735 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 FAM50BQ9Y247 325 aa19.29■□□□□ 0.68
SREBF1-211ENST00000476994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-211ENST00000476994 RB1P06400 928 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 CD52P31358 61 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 CTNNB1P35222 781 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 STX17P56962 302 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 PRPF4BQ13523 1007 aaKnown RBP19.28■□□□□ 0.68
SREBF1-211ENST00000476994 NCAPHQ15003 741 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 IQCB1Q15051 598 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 LEXMQ3ZCV2 418 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 EP400NLQ6ZTU2 488 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 CATSPER4Q7RTX7 472 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 GAS2L3Q86XJ1 694 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 ZBTB45Q96K62 511 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-211ENST00000476994 TMX1Q9H3N1 280 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 TSPY26PQ9H489 355 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 PDZD7Q9H5P4 517 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 NSUN3Q9H649 340 aaKnown RBP19.28■□□□□ 0.68
SREBF1-211ENST00000476994 DMAC2Q9NW81 257 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 PADI3Q9ULW8 664 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 TNFSF13BQ9Y275 285 aa19.28■□□□□ 0.68
SREBF1-211ENST00000476994 A0A1B0GUA9 196 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 HNRNPDLO14979 420 aaKnown RBP19.27■□□□□ 0.68
SREBF1-211ENST00000476994 NCK2O43639 380 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 FAM189A1O60320 539 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 SNRPFP62306 86 aaKnown RBP19.27■□□□□ 0.68
SREBF1-211ENST00000476994 LRRC63Q05C16 580 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 DSC3Q14574 896 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 EDRF1Q3B7T1 1238 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 ATF7IP2Q5U623 682 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 LRRC55Q6ZSA7 311 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 CPB2Q96IY4 423 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 LMAN2LQ9H0V9 348 aa19.27■□□□□ 0.68
SREBF1-211ENST00000476994 CGNQ9P2M7 1197 aaKnown RBP19.27■□□□□ 0.68
SREBF1-211ENST00000476994 TOM1L1O75674 476 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 ERLIN2O94905 339 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 AXLP30530 894 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 BTG3Q14201 252 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-211ENST00000476994 UBXN11Q5T124 520 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 SLC9A9Q8IVB4 645 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 DHX40Q8IX18 779 aaKnown RBP19.26■□□□□ 0.67
SREBF1-211ENST00000476994 SYCP3Q8IZU3 236 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 ENOX1Q8TC92 643 aaKnown RBP19.26■□□□□ 0.67
SREBF1-211ENST00000476994 CBWD1Q9BRT8 395 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 HSD3B7Q9H2F3 369 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 CBX8Q9HC52 389 aa19.26■□□□□ 0.67
SREBF1-211ENST00000476994 A0A0B4J269 797 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 ENPP3O14638 875 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 GPR182O15218 404 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 CLIC2O15247 247 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 MGEA5O60502 916 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 CAVIN2O95810 425 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 STAG3L1P0CL83 205 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 GARTP22102 1010 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 SSTR3P32745 418 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-211ENST00000476994 ZNF165P49910 485 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 LIG4P49917 911 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 MCL1Q07820 350 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 PAK2Q13177 524 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 PTCRAQ6ISU1 281 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-211ENST00000476994 MPZL3Q6UWV2 235 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 HS2ST1Q7LGA3 356 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 CDR2LQ86X02 465 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-211ENST00000476994 ZSWIM2Q8NEG5 633 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 GOLGA5Q8TBA6 731 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms