RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ERCC5P28715 1186 aaPredicted RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 GUCY1A2P33402 732 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 TDO2P48775 406 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 RBM25P49756 843 aaKnown RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 STAT2P52630 851 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 GJA9P57773 515 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 IKQ13123 557 aaPredicted RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 ACVR2BQ13705 512 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 SHROOM1Q2M3G4 852 aaPredicted RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 SBK1Q52WX2 424 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 DIEXFQ68CQ4 756 aaKnown RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 ZNF605Q86T29 641 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 FAM160B2Q86V87 743 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 TICAM2Q86XR7 235 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 MCF2L2Q86YR7 1114 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 RPUSD2Q8IZ73 545 aaKnown RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 GMCL1P1Q8NEA9 526 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 PDZD8Q8NEN9 1154 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 MICAL1Q8TDZ2 1067 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 CHURC1Q8WUH1 139 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 FERMT2Q96AC1 680 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 SLC12A9Q9BXP2 914 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 LRRCC1Q9C099 1032 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 MAF1Q9H063 256 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 AP5M1Q9H0R1 490 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 ARMT1Q9H993 441 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 SLC38A10Q9HBR0 1119 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 IL1RAPL2Q9NP60 686 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 CHST7Q9NS84 486 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 NYAP2Q9P242 653 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 ADD3Q9UEY8 706 aaKnown RBP4.13□□□□□ -1.75
XRN1-209ENST00000472625 GPR160Q9UJ42 338 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 TBX21Q9UL17 535 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 TCFL5Q9UL49 500 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 Q9Y3F1 56 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 PLXNB2O15031 1838 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 ALPK3Q96L96 1907 aa4.13□□□□□ -1.75
XRN1-209ENST00000472625 LTBP2Q14767 1821 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 FRMPD3Q5JV73 1810 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 TRIM43BA6NCK2 446 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 FADS2P1A8MWK0 482 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 F5H6K3 240 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 H0Y8X5 98 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ARVCFO00192 962 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ERC2O15083 957 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 PEX10O60683 326 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 PLA2G6O60733 806 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 PARNO95453 639 aaKnown RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 NDUFB10O96000 172 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 PGK1P00558 417 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 TP53P04637 393 aaPredicted RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 PGK2P07205 417 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ASGR1P07306 291 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 TMEM253P0C7T8 217 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 TSPY3P0CV98 308 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 TSPY8P0CW00 308 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 VAV1P15498 845 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 RFC2P35250 354 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ETFBP38117 255 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 SLC1A4P43007 532 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 CPT1AP50416 773 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 NKX3-2P78367 333 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 MRPS5P82675 430 aaKnown RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 KLRC3Q07444 240 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 CLEC16AQ2KHT3 1053 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 C9orf50Q5SZB4 431 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 FAM83BQ5T0W9 1011 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ANO1Q5XXA6 986 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 MRM1Q6IN84 353 aaKnown RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 RCSD1Q6JBY9 416 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 RNF111Q6ZNA4 994 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 NOL8Q76FK4 1167 aaKnown RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 ARMCX2Q7L311 632 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 TLK2Q86UE8 772 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ZNF444Q8N0Y2 327 aaPredicted RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 KLHDC9Q8NEP7 349 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 BHLHE22Q8NFJ8 381 aaPredicted RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 OR6P1Q8NGX9 317 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 HERVK_113Q902F9 699 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 APPBP2Q92624 585 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 TRIM43Q96BQ3 446 aaPredicted RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 MAP6Q96JE9 813 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 PLCD4Q9BRC7 762 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 C1QTNF1Q9BXJ1 281 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 MKRN2Q9H000 416 aaKnown RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 UPF3AQ9H1J1 476 aaKnown RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 TTYH1Q9H313 450 aaPredicted RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 HIPK3Q9H422 1215 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 SLC28A3Q9HAS3 691 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 VTA1Q9NP79 307 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 CD320Q9NPF0 282 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 IL23AQ9NPF7 189 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ECHDC1Q9NTX5 307 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 FAM86C1Q9NVL1 165 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 ISY1Q9ULR0 285 aaKnown RBP4.12□□□□□ -1.75
XRN1-209ENST00000472625 INPP5FQ9Y2H2 1132 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 PCDHB12Q9Y5F1 795 aa4.12□□□□□ -1.75
XRN1-209ENST00000472625 MYH1P12882 1939 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 TTC28Q96AY4 2481 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 TCAF2A6NFQ2 919 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms