RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PSMC5P62195 406 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 DSG1Q02413 1049 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 SNW1Q13573 536 aaKnown RBP10.42□□□□□ -0.74
VCL-204ENST00000472585 TOB2Q14106 344 aaPredicted RBP10.42□□□□□ -0.74
VCL-204ENST00000472585 KRT32Q14532 448 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 AMHR2Q16671 573 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 GET4Q7L5D6 327 aaPredicted RBP10.42□□□□□ -0.74
VCL-204ENST00000472585 URGCPQ8TCY9 931 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 HAS1Q92839 578 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 CPB2Q96IY4 423 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 PAAF1Q9BRP4 392 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 CXCL16Q9H2A7 254 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 EPC1Q9H2F5 836 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 KCNMB3Q9NPA1 279 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 XPNPEP1Q9NQW7 623 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 SH3GLB2Q9NR46 395 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 RGL1Q9NZL6 768 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 KANSL3Q9P2N6 904 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 PCDHA4Q9UN74 947 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 NUMBLQ9Y6R0 609 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 FAM170BA6NMN3 283 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
VCL-204ENST00000472585 TSPAN1O60635 241 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 HMGB1P09429 215 aaKnown RBP10.41□□□□□ -0.74
VCL-204ENST00000472585 HSPA4P34932 840 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 MLH1P40692 756 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 OR1G1P47890 313 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 QARSP47897 775 aaKnown RBP10.41□□□□□ -0.74
VCL-204ENST00000472585 GPC5P78333 572 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 NTHL1P78549 312 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 FGD1P98174 961 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 PPP2R5CQ13362 524 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 HTR4Q13639 388 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 INF2Q27J81 1249 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 EARS2Q5JPH6 523 aaKnown RBP10.41□□□□□ -0.74
VCL-204ENST00000472585 SRGAP1Q7Z6B7 1085 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 FERMT3Q86UX7 667 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 CDR2LQ86X02 465 aaPredicted RBP10.41□□□□□ -0.74
VCL-204ENST00000472585 GLYCTKQ8IVS8 523 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 BLIDQ8IZY5 108 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 ZBTB44Q8NCP5 570 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 NETO1Q8TDF5 533 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 FGF14Q92915 247 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 CEP170P1Q96L14 293 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
VCL-204ENST00000472585 RALYQ9UKM9 306 aaKnown RBP10.41□□□□□ -0.74
VCL-204ENST00000472585 MTF2Q9Y483 593 aaPredicted RBP10.41□□□□□ -0.74
VCL-204ENST00000472585 CEP295Q9C0D2 2601 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 CNTNAP2Q9UHC6 1331 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 A0A087WWV3 80 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 NCAM2O15394 837 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 ADAM12O43184 909 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 B4GALT5O43286 388 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 ITGA4P13612 1032 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 AKAP5P24588 427 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 GLUD2P49448 558 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 PTENP60484 403 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 AKAP17AQ02040 695 aaKnown RBP10.4□□□□□ -0.74
VCL-204ENST00000472585 PRKCQQ04759 706 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 SPIRE1Q08AE8 756 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 SPEM2Q0P670 501 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 MLF2Q15773 248 aaPredicted RBP10.4□□□□□ -0.74
VCL-204ENST00000472585 SLC44A4Q53GD3 710 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 ZBTB41Q5SVQ8 909 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 BLOC1S2Q6QNY1 142 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 PRSS55Q6UWB4 352 aaPredicted RBP10.4□□□□□ -0.74
VCL-204ENST00000472585 PARM1Q6UWI2 310 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 RNF149Q8NC42 400 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 DAGLBQ8NCG7 672 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 CCDC148Q8NFR7 591 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 ASAP3Q8TDY4 903 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 HDAC7Q8WUI4 952 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 OSBPL6Q9BZF3 934 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 PRKD2Q9BZL6 878 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 NXF3Q9H4D5 531 aaKnown RBP10.4□□□□□ -0.74
VCL-204ENST00000472585 PLEKHA4Q9H4M7 779 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 SH2B1Q9NRF2 756 aaPredicted RBP10.4□□□□□ -0.74
VCL-204ENST00000472585 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
VCL-204ENST00000472585 ANGPTL2Q9UKU9 493 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 KCNJ14Q9UNX9 436 aa10.4□□□□□ -0.74
VCL-204ENST00000472585 ZFP37Q9Y6Q3 630 aaPredicted RBP10.4□□□□□ -0.74
VCL-204ENST00000472585 DOCK6Q96HP0 2047 aa10.4□□□□□ -0.75
VCL-204ENST00000472585 FASNP49327 2511 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 PKD1L2Q7Z442 2459 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 SHISA7A6NL88 538 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 SLC30A4O14863 429 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 LILRB5O75023 590 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 SLITRK3O94933 977 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 P4HBP07237 508 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 YWHABP31946 246 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 PFKPQ01813 784 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 CTTNQ14247 550 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 EMC2Q15006 297 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 RTP2Q5QGT7 225 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 FUT10Q6P4F1 479 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 MOXD1Q6UVY6 613 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 RSPO2Q6UXX9 243 aaPredicted RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 MTSS1LQ765P7 747 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms