RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 MTCH2Q9Y6C9 303 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 LPXNO60711 386 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 ZNF202O95125 648 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 THP07101 528 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 POSTNQ15063 836 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 TIGD5Q53EQ6 642 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 L1TD1Q5T7N2 865 aaKnown RBP15.53■□□□□ 0.08
BRCA1-211ENST00000472490 PDE12Q6L8Q7 609 aaKnown RBP15.53■□□□□ 0.08
BRCA1-211ENST00000472490 SYCP3Q8IZU3 236 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 MAFAQ8NHW3 353 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-211ENST00000472490 PPP2R3CQ969Q6 453 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 TMEM169Q96HH4 297 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 ZFP42Q96MM3 310 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 STRA6Q9BX79 667 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 GBP3Q9H0R5 595 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 BLZF1Q9H2G9 400 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 NRDE2Q9H7Z3 1164 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 KLK14Q9P0G3 267 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-211ENST00000472490 SZT2Q5T011 3432 aa15.53■□□□□ 0.08
BRCA1-211ENST00000472490 LAMA2P24043 3122 aaKnown RBP15.52■□□□□ 0.08
BRCA1-211ENST00000472490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-211ENST00000472490 ABLIM1O14639 778 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 EIF3DO15371 548 aaKnown RBP eCLIP15.52■□□□□ 0.08
BRCA1-211ENST00000472490 PPP1R37O75864 691 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 ITGB1P05556 798 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 GALTP07902 379 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 HARSP12081 509 aaKnown RBP15.52■□□□□ 0.08
BRCA1-211ENST00000472490 SCNN1GP51170 649 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 FAM160A1Q05DH4 1040 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 CUL4BQ13620 913 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 FAM26FQ5R3K3 315 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 KRBA2Q6ZNG9 492 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 PLEKHA5Q9HAU0 1116 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 ALG13Q9NP73 1137 aaKnown RBP15.52■□□□□ 0.08
BRCA1-211ENST00000472490 HCSTQ9UBK5 93 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 FAN1Q9Y2M0 1017 aa15.52■□□□□ 0.08
BRCA1-211ENST00000472490 GBF1Q92538 1859 aa15.52■□□□□ 0.07
BRCA1-211ENST00000472490 A0A0B4J269 797 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 OGTO15294 1046 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 GRM6O15303 877 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 CLTAP09496 248 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 MYBP10242 640 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 AFF1P51825 1210 aaKnown RBP15.51■□□□□ 0.07
BRCA1-211ENST00000472490 OSTNP61366 133 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 DSC1Q08554 894 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 PSMD2Q13200 908 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 ZNF280BQ86YH2 543 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 FMR1NBQ8N0W7 255 aaPredicted RBP15.51■□□□□ 0.07
BRCA1-211ENST00000472490 SLC39A11Q8N1S5 342 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 MICALL1Q8N3F8 863 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 GSTCDQ8NEC7 633 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 SPPL3Q8TCT6 385 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 POF1BQ8WVV4 589 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 ZBTB45Q96K62 511 aaPredicted RBP15.51■□□□□ 0.07
BRCA1-211ENST00000472490 MSTO1Q9BUK6 570 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 GOLPH3LQ9H4A5 285 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 EXOC1Q9NV70 894 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 SLC38A7Q9NVC3 462 aa15.51■□□□□ 0.07
BRCA1-211ENST00000472490 UBE4BO95155 1302 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 KIAA0391O15091 583 aaKnown RBP15.5■□□□□ 0.07
BRCA1-211ENST00000472490 DDHD2O94830 711 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 OR1G1P47890 313 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 CASP5P51878 434 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 POU5F1Q01860 360 aaKnown RBP15.5■□□□□ 0.07
BRCA1-211ENST00000472490 TUSC3Q13454 348 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 HSP90AA2PQ14568 343 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-211ENST00000472490 COLGALT2Q8IYK4 626 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 GRAMD1CQ8IYS0 662 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 CEP120Q8N960 986 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 TMEM87AQ8NBN3 555 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 MICAL1Q8TDZ2 1067 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 POMGNT1Q8WZA1 660 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 IGSF21Q96ID5 467 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 TIGD1Q96MW7 591 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 TSPAN18Q96SJ8 248 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 COLEC11Q9BWP8 271 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 NSUN3Q9H649 340 aaKnown RBP15.5■□□□□ 0.07
BRCA1-211ENST00000472490 TLR9Q9NR96 1032 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 TSHZ2Q9NRE2 1034 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 MIOSQ9NXC5 875 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 DNAJB4Q9UDY4 337 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 STYXL1Q9Y6J8 313 aa15.5■□□□□ 0.07
BRCA1-211ENST00000472490 FSD2A1L4K1 749 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 NT5C1B-RDH14C9J2C7 533 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 NRP1O14786 923 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 KIF20AO95235 890 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 LDHAP00338 332 aaKnown RBP15.49■□□□□ 0.07
BRCA1-211ENST00000472490 PBX3P40426 434 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 SLC11A1P49279 550 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 SNRPFP62306 86 aaKnown RBP15.49■□□□□ 0.07
BRCA1-211ENST00000472490 EHHADHQ08426 723 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 XKR4Q5GH76 650 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 ALKAL1Q6UXT8 129 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 DDX53Q86TM3 631 aaKnown RBP15.49■□□□□ 0.07
BRCA1-211ENST00000472490 CD302Q8IX05 232 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 ZNF507Q8TCN5 953 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 SNX27Q96L92 541 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 UROC1Q96N76 676 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 RPF1Q9H9Y2 349 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms