RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 RNF169Q8NCN4 708 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 MDM1Q8TC05 714 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 SNX33Q8WV41 574 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 ADAM2Q99965 735 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 LRFN3Q9BTN0 628 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 TEX101Q9BY14 249 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 MTFR1LQ9H019 292 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 PRDM13Q9H4Q3 707 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.29□□□□□ -1.88
CCDC93-205ENST00000466171 GPRC5DQ9NZD1 345 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 LRIT1Q9P2V4 623 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 PRSS50Q9UI38 385 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 ZNF891A8MT65 544 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-205ENST00000466171 PJA2O43164 708 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 IGLV2-14P01704 120 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 CFIP05156 583 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 CRHR1P34998 444 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 PTH2RP49190 550 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 CLRN1P58418 232 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 SQSTM1Q13501 440 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 BMS1Q14692 1282 aaKnown RBP3.28□□□□□ -1.88
CCDC93-205ENST00000466171 TCEA2Q15560 299 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 ZNF362Q5T0B9 420 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-205ENST00000466171 GJC2Q5T442 439 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-205ENST00000466171 FAM180AQ6UWF9 173 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 BTNL9Q6UXG8 535 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 MICALCLQ6ZW33 695 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 AHI1Q8N157 1196 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 SH3TC2Q8TF17 1288 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 ZNF384Q8TF68 577 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 ZNF480Q8WV37 535 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 SMG7Q92540 1137 aaKnown RBP3.28□□□□□ -1.88
CCDC93-205ENST00000466171 PHACTR3Q96KR7 559 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 GPR101Q96P66 508 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-205ENST00000466171 HEPHQ9BQS7 1158 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 ANO3Q9BYT9 981 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 TBCCD1Q9NVR7 557 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 EVLQ9UI08 416 aaPredicted RBP3.28□□□□□ -1.88
CCDC93-205ENST00000466171 DMTF1Q9Y222 760 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 FRMD4BQ9Y2L6 1034 aa3.28□□□□□ -1.88
CCDC93-205ENST00000466171 RPTORQ8N122 1335 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 MYADML2A6NDP7 307 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 DRGXA6NNA5 263 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 MARCH11A6NNE9 402 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 TGM5O43548 720 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 KDM1AO60341 852 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 ITGB6P18564 788 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 POU3F2P20265 443 aaPredicted RBP3.27□□□□□ -1.89
CCDC93-205ENST00000466171 PTPN7P35236 360 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 CHN2P52757 468 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 MANFP55145 182 aaKnown RBP3.27□□□□□ -1.89
CCDC93-205ENST00000466171 IL2P60568 153 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 NHLH1Q02575 133 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 ZNF169Q14929 603 aaPredicted RBP3.27□□□□□ -1.89
CCDC93-205ENST00000466171 FAM47AQ5JRC9 791 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 AGAP9Q5VTM2 703 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 PAPD7Q5XG87 772 aaKnown RBP3.27□□□□□ -1.89
CCDC93-205ENST00000466171 TSHZ3Q63HK5 1081 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 CNNM4Q6P4Q7 775 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 ABHD15Q6UXT9 468 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 Q6ZNX1 250 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 ARHGEF25Q86VW2 580 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 MAPKAPK5Q8IW41 473 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 RHOT2Q8IXI1 618 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 FAM43AQ8N2R8 423 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 PPM1KQ8N3J5 372 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 FAM98AQ8NCA5 519 aaKnown RBP3.27□□□□□ -1.89
CCDC93-205ENST00000466171 OR56A1Q8NGH5 318 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 OR2W6PQ8NHA6 318 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 Q96MF0 132 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 ALOXE3Q9BYJ1 711 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 CASS4Q9NQ75 786 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 TMEM260Q9NX78 707 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 NOC2LQ9Y3T9 749 aaKnown RBP3.27□□□□□ -1.89
CCDC93-205ENST00000466171 PPP2R3BQ9Y5P8 575 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 CDY2AQ9Y6F7 541 aa3.27□□□□□ -1.89
CCDC93-205ENST00000466171 ORC4O43929 436 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 CTSSP25774 331 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 LSSP48449 732 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 RARRES1P49788 294 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 MRPS35P82673 323 aaKnown RBP3.26□□□□□ -1.89
CCDC93-205ENST00000466171 TERF2Q15554 542 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 RRP12Q5JTH9 1297 aaKnown RBP3.26□□□□□ -1.89
CCDC93-205ENST00000466171 PRAMEF14Q5SWL7 426 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 FOXR2Q6PJQ5 311 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 MED25Q71SY5 747 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 GPR149Q86SP6 731 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 LRRTM3Q86VH5 581 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 DRC7Q8IY82 874 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 TMEM132CQ8N3T6 1108 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 SMC1BQ8NDV3 1235 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 RNF31Q96EP0 1072 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 DNAJC2Q99543 621 aaKnown RBP3.26□□□□□ -1.89
CCDC93-205ENST00000466171 SLC29A3Q9BZD2 475 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 RNPEPQ9H4A4 650 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 GALNT9Q9HCQ5 603 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 KMT5AQ9NQR1 393 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 SEMA4GQ9NTN9 838 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 SLC17A6Q9P2U8 582 aa3.26□□□□□ -1.89
CCDC93-205ENST00000466171 TMEM127O75204 238 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms