RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 SNTG2Q9NY99 539 aa14.31□□□□□ -0.12
COL28A1-206ENST00000465339 DNAJB4Q9UDY4 337 aa14.31□□□□□ -0.12
COL28A1-206ENST00000465339 FAN1Q9Y2M0 1017 aa14.31□□□□□ -0.12
COL28A1-206ENST00000465339 ZDHHC9Q9Y397 364 aa14.31□□□□□ -0.12
COL28A1-206ENST00000465339 REV3LO60673 3130 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 EYSQ5T1H1 3165 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 FSD2A1L4K1 749 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 FSCN2O14926 492 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 TRAK2O60296 914 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 MCF2P10911 925 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 IRS1P35568 1242 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 ME1P48163 572 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 SLC11A1P49279 550 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 SCNN1GP51170 649 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 TJAP1Q5JTD0 557 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 TMC7Q7Z402 723 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 DDX53Q86TM3 631 aaKnown RBP14.3□□□□□ -0.12
COL28A1-206ENST00000465339 COLGALT2Q8IYK4 626 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 GSTCDQ8NEC7 633 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 DDX12PQ92771 950 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 RPS6KC1Q96S38 1066 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 LRRC27Q9C0I9 530 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 CUEDC2Q9H467 287 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 ZHX3Q9H4I2 956 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 UBE2ZQ9H832 354 aaPredicted RBP14.3□□□□□ -0.12
COL28A1-206ENST00000465339 KLK14Q9P0G3 267 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 TCHHQ07283 1943 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 TRIP11Q15643 1979 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 PRUNE2Q8WUY3 3088 aa14.3□□□□□ -0.12
COL28A1-206ENST00000465339 A0A087X0B3 334 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 MYMKA6NI61 221 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 NRP1O14786 923 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 TOM1L1O75674 476 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 GAP43P17677 238 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 PROZP22891 400 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 GRM5P41594 1212 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 DSC1Q08554 894 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 HYAL1Q12794 435 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 GRIK3Q13003 919 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 CTC1Q2NKJ3 1217 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 ZNF568Q3ZCX4 644 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 AXDND1Q5T1B0 1012 aaPredicted RBP14.29□□□□□ -0.12
COL28A1-206ENST00000465339 SHC4Q6S5L8 630 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 MPZL3Q6UWV2 235 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 DYMQ7RTS9 669 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 FAM178BQ8IXR5 827 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 PDILTQ8N807 584 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 IQUBQ8NA54 791 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 CDCA3Q99618 268 aaPredicted RBP14.29□□□□□ -0.12
COL28A1-206ENST00000465339 TCF25Q9BQ70 676 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 CCDC94Q9BW85 323 aaPredicted RBP14.29□□□□□ -0.12
COL28A1-206ENST00000465339 TLE6Q9H808 572 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 WDR70Q9NW82 654 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 FAM13BQ9NYF5 915 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 SEL1LQ9UBV2 794 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 TBX20Q9UMR3 447 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 PCDHA7Q9UN72 937 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 CITO14578 2027 aa14.29□□□□□ -0.12
COL28A1-206ENST00000465339 K7ENM7 598 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 CLDN3O15551 220 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 B4GALT3O60512 393 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 RECQL4O94761 1208 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 CSPG5O95196 566 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 THP07101 528 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 OR1G1P47890 313 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 YARSP54577 528 aaKnown RBP14.28□□□□□ -0.12
COL28A1-206ENST00000465339 KRT85P78386 507 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 GTF2BQ00403 316 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 AMPD3Q01432 767 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 TFF2Q03403 129 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 ADAM15Q13444 863 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 SMC1AQ14683 1233 aaKnown RBP14.28□□□□□ -0.12
COL28A1-206ENST00000465339 ZBTB33Q86T24 672 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 EFHBQ8N7U6 833 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 MRPL43Q8N983 215 aaKnown RBP14.28□□□□□ -0.12
COL28A1-206ENST00000465339 DNAJC19Q96DA6 116 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 PYM1Q9BRP8 204 aaKnown RBP14.28□□□□□ -0.12
COL28A1-206ENST00000465339 COLEC11Q9BWP8 271 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 CDT1Q9H211 546 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 TNMDQ9H2S6 317 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 ST6GALNAC4Q9H4F1 302 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 IGFLR1Q9H665 355 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 TOPORSQ9NS56 1045 aaPredicted RBP14.28□□□□□ -0.12
COL28A1-206ENST00000465339 CLDND1Q9NY35 253 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
COL28A1-206ENST00000465339 CXCL14O95715 111 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 PIGRP01833 764 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 KCNA5P22460 613 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 NRIP1P48552 1158 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 NUCB2P80303 420 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 TUSC3Q13454 348 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 E2F4Q16254 413 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 PUS10Q3MIT2 529 aaKnown RBP14.27□□□□□ -0.13
COL28A1-206ENST00000465339 LEXMQ3ZCV2 418 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 RESP18Q5W5W9 173 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 EP400NLQ6ZTU2 488 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 ZNF720Q7Z2F6 126 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 ADGRD2Q7Z7M1 963 aa14.27□□□□□ -0.13
COL28A1-206ENST00000465339 RBM23Q86U06 439 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms