RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 CCDC51Q96ER9 411 aa14.58□□□□□ -0.08
ATF3-208ENST00000465155 TMX1Q9H3N1 280 aa14.58□□□□□ -0.08
ATF3-208ENST00000465155 ANK1P16157 1881 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 LRRC10BA6NIK2 292 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 CCDC85CA6NKD9 419 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 TPM2P07951 284 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 STAG3L1P0CL83 205 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 KRT13P13646 458 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 COPB1P53618 953 aaKnown RBP14.57□□□□□ -0.08
ATF3-208ENST00000465155 UBASH3AP57075 661 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 CYP24A1Q07973 514 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 BFSP1Q12934 665 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 GPNMBQ14956 572 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 DCAF17Q5H9S7 520 aaPredicted RBP14.57□□□□□ -0.08
ATF3-208ENST00000465155 UBXN11Q5T124 520 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 TCERG1LQ5VWI1 586 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 SARM1Q6SZW1 724 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 INTS8Q75QN2 995 aaKnown RBP14.57□□□□□ -0.08
ATF3-208ENST00000465155 TMEM192Q8IY95 271 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 MFSD14AQ96MC6 490 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 TRIM5Q9C035 493 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 RBAKQ9NYW8 714 aaPredicted RBP14.57□□□□□ -0.08
ATF3-208ENST00000465155 IFNKQ9P0W0 207 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
ATF3-208ENST00000465155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.57□□□□□ -0.08
ATF3-208ENST00000465155 CITO14578 2027 aa14.57□□□□□ -0.08
ATF3-208ENST00000465155 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 PES1O00541 588 aaKnown RBP14.56□□□□□ -0.08
ATF3-208ENST00000465155 MGEA5O60502 916 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 PARNO95453 639 aaKnown RBP14.56□□□□□ -0.08
ATF3-208ENST00000465155 VAMP7P51809 220 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 MAN2A1Q16706 1144 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 KYAT1Q16773 422 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 PLEKHG4Q58EX7 1191 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 PLEKHO2Q8TD55 490 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 TRIM43Q96BQ3 446 aaPredicted RBP14.56□□□□□ -0.08
ATF3-208ENST00000465155 CCDC127Q96BQ5 260 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 NAP1L5Q96NT1 182 aaPredicted RBP14.56□□□□□ -0.08
ATF3-208ENST00000465155 ADAM2Q99965 735 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 NXF3Q9H4D5 531 aaKnown RBP14.56□□□□□ -0.08
ATF3-208ENST00000465155 HES2Q9Y543 173 aa14.56□□□□□ -0.08
ATF3-208ENST00000465155 KIAA0355O15063 1070 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 TIMP1P01033 207 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 CLTAP09496 248 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 TRIM49P0CI25 452 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 TRIM49CP0CI26 452 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 CXCL8P10145 99 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 RAG1P15918 1043 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 ITGB8P26012 769 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 GRM5P41594 1212 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 DLG4P78352 724 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 DSC3Q14574 896 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 ENOX2Q16206 610 aaKnown RBP14.55□□□□□ -0.08
ATF3-208ENST00000465155 FILIP1LQ4L180 1135 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 VWA3BQ502W6 1294 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 MIIPQ5JXC2 388 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 BRSK2Q8IWQ3 736 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 DBF4BQ8NFT6 615 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 SLC35C1Q96A29 364 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 FAM212AQ96EL1 285 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 ACAP3Q96P50 834 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 CCDC94Q9BW85 323 aaPredicted RBP14.55□□□□□ -0.08
ATF3-208ENST00000465155 APOL6Q9BWW8 343 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 XPO4Q9C0E2 1151 aaKnown RBP14.55□□□□□ -0.08
ATF3-208ENST00000465155 RPF1Q9H9Y2 349 aaKnown RBP14.55□□□□□ -0.08
ATF3-208ENST00000465155 FAM105AQ9NUU6 356 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 IPPQ9Y573 584 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 TET1Q8NFU7 2136 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 RALGAPA2Q2PPJ7 1873 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 A0A1B0GTH6 734 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 DLATP10515 647 aaKnown RBP14.55□□□□□ -0.08
ATF3-208ENST00000465155 WNT7BP56706 349 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 KCNH2Q12809 1159 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 PSMD6Q15008 389 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 DEFB128Q7Z7B8 93 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 USP37Q86T82 979 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 SMG8Q8ND04 991 aaKnown RBP14.55□□□□□ -0.08
ATF3-208ENST00000465155 TMC2Q8TDI7 906 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 PARD3BQ8TEW8 1205 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 SEPT8Q92599 483 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 FNBP1Q96RU3 617 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 NDST4Q9H3R1 872 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 MMRN2Q9H8L6 949 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 PDE11AQ9HCR9 933 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
ATF3-208ENST00000465155 SNTG2Q9NY99 539 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 PCDHB2Q9Y5E7 798 aa14.55□□□□□ -0.08
ATF3-208ENST00000465155 TRIP11Q15643 1979 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 LRRIQ3A6PVS8 624 aaPredicted RBP14.54□□□□□ -0.08
ATF3-208ENST00000465155 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 CBFA2T2O43439 604 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 CXCL10P02778 98 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 PPP2R3AQ06190 1150 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 C7orf61Q8IZ16 206 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 APBB2Q92870 758 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 POP1Q99575 1024 aaKnown RBP14.54□□□□□ -0.08
ATF3-208ENST00000465155 FTHL17Q9BXU8 183 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 RGS18Q9NS28 235 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 INTS13Q9NVM9 706 aa14.54□□□□□ -0.08
ATF3-208ENST00000465155 PRKAG2Q9UGJ0 569 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms