RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ZNF623O75123 536 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 NPTXRO95502 500 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 STAG3L1P0CL83 205 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 EPB41P11171 864 aaKnown RBP15.62■□□□□ 0.09
COL6A1-202ENST00000463060 WNT7BP56706 349 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 CLDN10P78369 228 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 CYP24A1Q07973 514 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 HSP90AA2PQ14568 343 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-202ENST00000463060 KYAT1Q16773 422 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 THNSL1Q8IYQ7 743 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 TMC2Q8TDI7 906 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 PARD3BQ8TEW8 1205 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 LINC01599Q8WXQ3 324 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 ADPGKQ9BRR6 497 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 TUBGCP2Q9BSJ2 902 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 RGS18Q9NS28 235 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 ARMCX3Q9UH62 379 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-202ENST00000463060 A0A0U1RQF3 1178 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 A0A1B0GTH6 734 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 CDK11BP21127 795 aaKnown RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 RFC2P35250 354 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 MATR3P43243 847 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 MRE11P49959 708 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 COPB1P53618 953 aaKnown RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 PSMD6Q15008 389 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 ENOX2Q16206 610 aaKnown RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 TMEM132AQ24JP5 1023 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 SLC10A6Q3KNW5 377 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 CCDC40Q4G0X9 1142 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 MFSD5Q6N075 450 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 ALKAL1Q6UXT8 129 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 INTS8Q75QN2 995 aaKnown RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 APBB1IPQ7Z5R6 666 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 BRSK2Q8IWQ3 736 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 SLC35C1Q96A29 364 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 NAP1L5Q96NT1 182 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 ADAM2Q99965 735 aa15.61■□□□□ 0.09
COL6A1-202ENST00000463060 TSPYL2Q9H2G4 693 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 RTN4Q9NQC3 1192 aaKnown RBP15.61■□□□□ 0.09
COL6A1-202ENST00000463060 TTC26A0AVF1 554 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 C9IYK1 514 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 ENPP3O14638 875 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 HARSP12081 509 aaKnown RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 ZSCAN20P17040 1043 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 ATF7P17544 494 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 MTIF2P46199 727 aaKnown RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 VAMP7P51809 220 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 DLG4P78352 724 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 BFSP1Q12934 665 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 NR1I3Q14994 352 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 MAN2A1Q16706 1144 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 XKR4Q5GH76 650 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 TWF2Q6IBS0 349 aaKnown RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 ZNF598Q86UK7 904 aaKnown RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 CRIPAKQ8N1N5 446 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 SEPT8Q92599 483 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 APBB2Q92870 758 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 FTHL17Q9BXU8 183 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 NXF3Q9H4D5 531 aaKnown RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 FAM105AQ9NUU6 356 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 INTS13Q9NVM9 706 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 MAGEC2Q9UBF1 373 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-202ENST00000463060 HES2Q9Y543 173 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 IPPQ9Y573 584 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 PCDHB2Q9Y5E7 798 aa15.6■□□□□ 0.09
COL6A1-202ENST00000463060 LRRIQ3A6PVS8 624 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-202ENST00000463060 PMM2O15305 246 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 RAG1P15918 1043 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 PPP2R3AQ06190 1150 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 VWA3BQ502W6 1294 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 C15orf39Q6ZRI6 1047 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 SLC24A5Q71RS6 500 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 ZNF516Q92618 1163 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 HTATIP2Q9BUP3 242 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 VPS16Q9H269 839 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 CXCL16Q9H2A7 254 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 PDE11AQ9HCR9 933 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 SNTG2Q9NY99 539 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 TAB2Q9NYJ8 693 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 RBAKQ9NYW8 714 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-202ENST00000463060 ANK1P16157 1881 aa15.59■□□□□ 0.09
COL6A1-202ENST00000463060 LGALS16A8MUM7 142 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 LACTBL1A8MY62 500 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 CXCL8P10145 99 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 KRT13P13646 458 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 RAB27AP51159 221 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 UBASH3AP57075 661 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 OSTNP61366 133 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 PPP3CAQ08209 521 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 KCNH2Q12809 1159 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 ECHDC2Q86YB7 292 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 ACAP3Q96P50 834 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 POP1Q99575 1024 aaKnown RBP15.58■□□□□ 0.08
COL6A1-202ENST00000463060 CCDC94Q9BW85 323 aaPredicted RBP15.58■□□□□ 0.08
COL6A1-202ENST00000463060 NDST4Q9H3R1 872 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 ASB7Q9H672 318 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 RPF1Q9H9Y2 349 aaKnown RBP15.58■□□□□ 0.08
COL6A1-202ENST00000463060 PLEKHA5Q9HAU0 1116 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms